Gossypium hirsutum (upland cotton): 107899526
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Entry
107899526 CDS
T04793
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ghi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
107899526
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
107899526
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107899526
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
107899526
Glycosyltransferases [BR:
ghi01003
]
Glycan extension
P blood group
107899526
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
TcdA_TcdB
Caps_synth
Motif
Other DBs
NCBI-GeneID:
107899526
NCBI-ProteinID:
XP_016680756
UniProt:
A0A1U8IRN6
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Position
D04:complement(47926268..47928260)
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AA seq
410 aa
AA seq
DB search
MAAKNFGCRVVNRSKSPVVFMILFALLMFSMLADSIVSKISLESAAFNQKRDYQALQSPK
VVRNIKRNVVFPLPLTVSTQNKIIRVDNEHGIGKFRRRRLPEYEIFTSDELTKKFHGRVL
EFFNHGCEVHFFMTWIAKVGSFGRREIMAVESVFKAHPNGCLMILSRTMDSVQGYRILKP
LLDRGFKVLAVAPDFPFLVKNTPAEAWLDDMKSGKKDPGEIPLAQNLSNLLRLAVLYKYG
GVYLDTDFIVLRSFKGLKNTIGAQSIDVVSKNWTRLNNAVLVFDMNHPLVLKFIEEFALT
FDGNKWGHNGPYMVSRVVRGVEGRAGYNFTILPPMAFYPVDWMKIGSFFKLPKDSAGWRW
IEAKVWQLKRQTYGVHLWNKQSSKLMVEEGSVMGRLMGENCVLCKHVYSS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaaaattttggctgccgggttgttaatcgatccaaatcgcctgttgttttt
atgatcttgtttgctcttctaatgttttccatgctggcagatagtattgtttctaaaata
tcacttgaatcggctgctttcaatcagaaacgtgattaccaggcgttgcagagtccgaaa
gttgtaagaaatatcaagaggaatgttgtttttcctctgccattgactgtttctacacaa
aacaagatcatcagggtcgataatgaacatgggattgggaaattcaggagaagaagactg
ccagagtatgagattttcacgtcagatgagttgacaaagaagttccatggccgagttctt
gaattcttcaaccatgggtgcgaggttcacttcttcatgacatggattgccaaggtaggg
tcctttggaagaagggaaatcatggctgtggaaagcgtttttaaggctcatcctaatggt
tgcttgatgattctatccagaaccatggactcagtacaaggttacaggatcctgaaaccg
ttgcttgatcgtggtttcaaagttctagcagtggccccagacttcccatttctggtgaag
aacacacccgctgaagcttggcttgatgatatgaagagtgggaaaaaggaccctggtgag
attccattggctcagaatctatctaatttattgaggcttgcagttttatacaagtacggt
ggtgtttacttagacacggacttcatagtgctgaggagttttaaagggttgaagaacaca
attggagcacaaagcattgatgtggtgtctaagaactggacaagattgaacaatgcagtg
ctggtctttgatatgaaccatccactcgtactcaagttcattgaggaatttgctttgaca
tttgatgggaacaaatggggacacaatgggccctatatggtttccagggtagttcgtgga
gtagaagggagagctggttataattttacgatcttaccacctatggcattttatcctgtt
gattggatgaaaatagggagcttctttaagctgcctaaagatagcgctgggtggagatgg
atagaagctaaggtgtggcagctaaagaggcaaacatatggagtacatctctggaataag
caaagtagcaaattaatggttgaagagggaagtgtaatgggaagattaatgggagagaat
tgtgttttgtgtaaacatgtatatagttcttaa
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