Gossypium hirsutum (upland cotton): 107899593
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Entry
107899593 CDS
T04793
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107899593
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
107899593
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
Cnd1
INTS4_C
HEAT_2
RTP1_C1
HEAT_GCN1_C
PDS5
Adaptin_N
HEAT_MROH2B_C
TVHS-like
Motif
Other DBs
NCBI-GeneID:
107899593
NCBI-ProteinID:
XP_016680839
UniProt:
A0A1U8IY26
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All DBs
Position
D04:49366426..49372858
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AA seq
959 aa
AA seq
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MGMVAELERRQSAMELHIINSIQQSLDNNQPLSFQALASLRSLIINPATPDSTLSSVLDA
LSRSLQLNRDPVFLHHALKLLSDLASHRPHLSPFALDLLRSDSLFSSASPRLVGESLSVL
LSLASIGNDIDAARFVSLCLGPSVSVRQCLLRNAEKLVFRESVLLAVFLGFTRDPYPYVR
KEALDGLVKLCKNGDFDDRDVIEGCYCRAVELLRDAENYVRSAAVRAVCEWGRLLVICSE
DMNKQDSSDAVFIQLGCMVRDMSVDVRLEAFEALGKIGLVSEDILLQTLSKKVLGINKDK
AFKPVEGLDISASAVAGAYIHGLEDEFSEVRMSACYSLRTLTVFSLRFACEALNLMMDML
NDDSTVVRLQALDTIHHMATSNHLKVEKIHIHRFLSALVDSSSVIRSMTRKILKLAKLPQ
FKLFKLCIDGLLGNLEIYPQDEADVFSALFHIGRNHGKFTVHIIEEVSPEMEPASGGKLS
FDSTRVAAFLVLAISAPLSHEKDVSAIPPRIFSYAVTWLGRISYGLSDLMNQEKLLAYLS
ECSRSSTISLADFKINEALLTVESDAPIPLCSKVDSPVSMPFWKDSGGTSDYHHQEFLSL
GKSAAHAEYELGEHSELRKYVNLIFKKVKDFWSLVELGCTTEAFKGIRACKEEVASFTAD
SPGSSGAVAFTLQYLQVIGMLAKVWGHLRPTKMLNPYGVGKLELLFAKLDRRLREISNRF
IGLSKGEELQILDLVLVACLLRLSKMEICCCNAAMKLLLSTVAHVEYLHKEGSIELSNFV
TEVKKSLHDADSSSSSSTCKPLLFKKLLDSFSLQQFVLYGTPRYIHAELAVPSNDSENPL
PFIPGIPASIPLAITLHNVLTESRLWVRISMNEESTQFVFLDLNLIRNEKRSINVVREFT
FVAPFYRTPKAISFTVRASLGLECFRENIDRVKVFGGPKCELTYLCPEKEIFLCKSTEC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgggcatggttgcagagctcgagcgcaggcagtcggcaatggagctgcacattataaac
tcaatccaacaatccctcgacaataaccaacccctctctttccaagctctagcttccctc
agatccctcattatcaaccctgccacccccgattccacactctcctcagtcctcgacgcc
ctaagtcgctctctccaactcaatcgcgaccccgtcttcctacatcacgctcttaagctc
ctcagcgacctcgcctctcaccgcccccacctatcccctttcgcactcgacttgcttcgt
tccgactcactcttctcctccgcttcgcctcgtcttgttggtgagtcactctctgtactt
ctttctctcgcttccatcggaaacgacatcgacgccgctcgtttcgtctctctctgcctt
ggcccttcggtttctgtgcgacaatgcttattgagaaatgctgagaagcttgtctttagg
gaatcggtgttgttagccgtttttttagggtttacaagggatccgtatccgtatgtgagg
aaagaagctttggatggattggtgaaactgtgtaagaatggtgattttgatgatcgtgat
gttatcgagggatgctactgccgtgctgttgagttgctccgtgacgcagagaattatgtt
agatctgcagcagttcgcgccgtatgtgaatggggtagattgcttgttatatgcagtgaa
gacatgaacaagcaagactcatcagatgcagtgtttatccagcttggctgtatggtaaga
gatatgagtgtagatgtaaggcttgaagcctttgaagctctagggaagataggacttgta
tctgaagatatcttactacaaaccttgtctaagaaagtcctaggaatcaacaaagataaa
gctttcaaaccagtagaagggcttgacatttcagcttctgctgttgctggagcttatata
catggacttgaggatgagttctctgaggtacgaatgtctgcctgttactctttgcgaacg
cttactgtcttctctttgcgatttgcttgtgaagccttaaacctgatgatggacatgctg
aatgatgattcaacggttgtcaggctgcaagctcttgatacaatacatcacatggcaacc
agcaatcatctaaaagttgaaaaaatacacattcacaggtttctgagcgcacttgttgac
agcagttctgtcataagatccatgacaaggaaaatactcaaattagccaagttgccacaa
ttcaagttgtttaaattgtgtattgatggccttcttggaaatttggagatatatccacag
gatgaagctgatgtgttttctgctctgtttcatattgggcgaaatcatgggaagttcaca
gttcacattattgaggaagtttctccagagatggagccagcttctggaggcaaattgagc
tttgatagtacaagggtagcggcatttcttgtgctagccatctcagctccactgtcacat
gaaaaggatgttagtgctattccacctagaatattttcttatgcagttacatggcttggg
agaatctcttatggtttaagtgatcttatgaaccaagaaaagcttttggcttatttatcc
gagtgcagtagatcctcaacaatttctcttgctgacttcaaaataaatgaggcattgctg
acagtagaaagtgatgccccaattcctctctgttctaaggttgatagtcctgtcagcatg
cccttctggaaagatagtggggggacctctgattatcatcatcaggaatttttgagttta
ggaaagtcagctgctcacgcagaatatgagttgggggagcattctgaattaagaaagtat
gtgaaccttatctttaaaaaggtcaaggacttttggtcattggtcgagttaggctgcact
actgaagcattcaagggtataagggcctgtaaggaagaagtggcatcatttaccgcagat
tccccaggatcttccggtgctgtagcatttactctgcagtatctccaagttataggaatg
cttgctaaagtttggggacaccttaggccaacaaaaatgcttaatccttatggagtggga
aaattagagcttctatttgcaaaattggacaggaggctcagggaaatcagtaataggttc
attggtttgtccaaaggagaagagttgcaaatattggacctggtacttgtggcttgtctt
ttgagattgtccaaaatggagatttgctgttgcaatgcggcaatgaaattattgttgtct
acagttgcccatgtagaatatctccacaaggagggatctattgaactgtctaattttgta
actgaagttaagaaatcattgcatgatgctgactcttcaagcagcagtagtacctgcaag
ccacttctcttcaagaagttacttgactccttttcccttcagcagtttgtgttatatgga
actcccaggtacatacatgcagaactggcagtcccgagtaatgattctgaaaaccctctt
ccttttattccgggaatccctgcatctataccacttgcaatcactttgcacaacgttttg
actgaaagtaggttgtgggtgaggataagtatgaatgaggagtcaactcagtttgtattt
ttagatttgaacctaatcagaaatgaaaagagaagcattaatgtggtgagggaattcaca
tttgtggctcccttctaccgaaccccaaaagctatttcatttacggtgagggcttcttta
ggtttagaatgctttagggagaatattgatcgagtcaaagtctttgggggtccaaaatgt
gaactaacatatctttgcccagagaaagagatttttctatgtaagagcactgaatgttaa
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