Gossypium hirsutum (upland cotton): 107900519
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Entry
107900519 CDS
T04793
Name
(RefSeq) tocopherol cyclase, chloroplastic isoform X1
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00130
Ubiquinone and other terpenoid-quinone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01240
Biosynthesis of cofactors
Module
ghi_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
107900519
Enzymes [BR:
ghi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
107900519
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Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
107900519
NCBI-ProteinID:
XP_016681625
UniProt:
A0A1U8IU69
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Position
A07:complement(2920262..2925478)
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AA seq
528 aa
AA seq
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MDSNICSLNQLHQFSSCFIGLHSQNSKSTLKFSQSSTFNAFSPRELRPLRLGFRSNSPVV
ACRSVSEIETETSSPAAKRSVSVSPVYVPTPVNRDTRTPHSGYHFDGTTRQFFEGWYFKV
SIPERKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGAKGKYICQYSEESQN
FWGSRHELTLGNTFVANKASRPPSKVVPPQEFNRKVLEGFQVSPLWNQGFICDDGRTYYA
KTVKTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGTCFSPSC
FEILCIDFLLGFCWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISL
TAAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHT
VELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMA
ALEVGGGPWFNTWKGKTTTPEVIKSALQVPIDVEGIFGLAPFLKPPGL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaacatttgctcactcaaccagcttcaccaattttcttcttgttttattgga
cttcactctcaaaactccaaatccacccttaaattctctcaatcttcaactttcaatgca
ttctctccaagagaactccgccctcttaggctagggtttcgatcgaactcgccggttgtc
gcatgccgctccgtctccgagattgaaaccgaaacttcttctccggcagccaagaggtct
gtttccgtcagtccggtttatgtccccacgccagttaatcgagacactcgcactcctcac
agcgggtaccactttgatgggactactcgacaattttttgagggttggtactttaaggta
tcaatcccagaacgaaaacagagcttttgcttcatgtactcggtggagaatcctgcattt
aagaggacactgacaccattggaaatgctgcagcacggacctagatttacaggagttggg
gcacaagttcttggtgctaaaggcaagtatatatgccaatacagcgaggaatctcaaaac
ttttggggaagcagacatgagctaacattggggaatacttttgtagccaacaaagcctca
cgacctccaagtaaggtggttcctccccaggaattcaatagaaaagttttggaaggcttt
caagttagccctctttggaatcagggctttatttgtgatgatggcaggacatattatgca
aaaactgttaaaactgcacgttgggagtacagtacacgccccatatatggatggggtgat
gttgggtccaagcagaagtccacagctggctgggctgcagctcttcccatatttgaaccc
cattggcaaatttgcatggccagtggactttcaacaggcacttgcttttctccttcctgt
tttgaaatactttgcattgatttcctcttgggcttttgctggatagagtgggatggtgaa
aggtttgagtttcaagatgccccttcatattcagaaaagaattggggtggaggcttccct
agaaaatggttttgggctcaatgtaatgtctttgaaggtgctagcggaaaaatttctctg
actgctgctggtggattaaggcaactgcctggactgactgagaccttcgaaaatactgca
ttgattggagtgcactatgatggaattttctatgaatttgtgccatggaatggtgttgta
acttgggaaattgcccagtggggttactggaacattgctgcagaaaacaaaacacatacg
gttgagttagaggcaacaacaactgattcgggtacgacattgcgtgctccaacagtagag
gctggtcttactccagcttgtttagacacttgtttaggtgatctaacattgaagatctgg
gaaaaaaatgttggtggcagtaaaggcaagctgatcttggatgttaaaagtgacatggcg
gcactagaagtaggaggagggccatggtttaacacttggaaaggcaagactacaacacca
gaggtgattaaaagtgcacttcaagttccaattgatgtggaaggtatatttggtttggct
ccatttttaaaaccccctgggctataa
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