Gossypium hirsutum (upland cotton): 107903283
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Entry
107903283 CDS
T04793
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107903283
04120 Ubiquitin mediated proteolysis
107903283
09124 Replication and repair
03420 Nucleotide excision repair
107903283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107903283
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107903283
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107903283
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107903283
Multi subunit type E3
SCF complex
Ring finger protein
107903283
Cul2 complex
107903283
Cul3 complex
107903283
Cul4 complex
107903283
Cul7 complex
107903283
Cul8 complex
107903283
Cul9 complex
107903283
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107903283
TCR (transcription coupled repair) factors
Cul4-CSA complex
107903283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-RING_16
RH_dom
Motif
Other DBs
NCBI-GeneID:
107903283
NCBI-ProteinID:
XP_016684799
UniProt:
A0A1U8J9B2
LinkDB
All DBs
Position
D05:2989668..2991335
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AA seq
101 aa
AA seq
DB search
MSTQTSGSTAPSKHFDMKKWSSVAFWSWDIVVDNCAVCRNHIMDLCIECQANQIHGADNE
CTVAWGACNHAFHFHCISRWLQNRSVCPLDNAEWEFRKYGR
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgtctacccaaacttccggcagcaccgccccttccaagcacttcgacatgaaaaagtgg
agttcggttgccttctggtcctgggatattgtcgtggataattgtgcggtttgcaggaat
cacatcatggatctctgtatcgaatgccaagccaaccaaatacacggtgccgataatgaa
tgcactgttgcgtggggtgcatgcaaccatgcattccactttcactgcatcagtcgatgg
ctgcagaaccggtcagtgtgtcctttggataatgctgaatgggagttccgaaagtatggt
cgctag
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