Gossypium hirsutum (upland cotton): 107904486
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Entry
107904486 CDS
T04793
Name
(RefSeq) transcription factor EGL1-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107904486
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107904486
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_SAC51
bHLH_IRO3
IMD
Tubulin-binding
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
107904486
NCBI-ProteinID:
NP_001313863
UniProt:
Q9ATD8
A0ABM2BFR9
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Position
D11:1829683..1832682
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AA seq
624 aa
AA seq
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MATTGVQNQEKVPMNLKQQLALAVRNIQWSYGIFWSISAKQPGVLEWGDGYYNGDIKTRK
TVQSFEPKADDQLGLQRSEQLRELFESLSAGETSPHTKRPSVALSPEDLTATEWYYLVCM
SFVFNIDQGLPGRTLSIGQPIWLCNAQYADSKVFSRSLVAKSASIQTVVCFPYAGGVIEL
GVTDLVSKDPGLIHRVKSLLLDAPETITGNINDVACPGLGPNEIESELSPFLGCEQLERG
SPNEISDGFEPNQPAEDPFVNGGASQVQSWQFMDDHHSLNTSDCISQTFSDHEDVVPLCQ
GENDNDNDFRDVEECDRINRAAFDPISDDMHYRTVVSVLLKSSHQFILGPHFGNSNKESG
FISWKMNSSVKYRKAKVEIPQKLLKKMLFEVPRMHDKGLLKSPQGGDGVGDAVWRPEADE
LCKSHVLSERRRREKINERLMILKSLVPTNSKADKVSILDDTIEYLQDLERRVEELECCR
ELTESETKTKQKHHRDRAERTSSNKVTNGNKSASSNKRKAYDIEETKQDIDHVASKDGST
ENLTVSTNNKDLTIEFKCRWRDGILFEIMDALSVLDLDCHSVQSSTIEGILSVTIKSKYK
GSSVAKPGTIKQALLQKVQSLTFV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctactactggggttcaaaatcaagagaaggtcccaatgaacttgaagcaacaactt
gctcttgctgttagaaacattcaatggagctatgggattttctggtccatttcagctaaa
caaccaggggtcttggaatggggtgatggttattacaatggagatataaagacaaggaaa
acagttcaatcttttgaacctaaagctgatgaccaactaggtttacaaagaagtgagcaa
ttaagagaactatttgaatcactttcagctggtgaaactagtcctcatactaaaagacct
tcagttgcattatcccctgaagatctcactgctactgaatggtattatttggtctgtatg
tcatttgtattcaacattgaccaaggattgcctggaagaacattatcaattggtcaacct
atttggctatgtaatgctcaatatgcagatagtaaagtgtttagtcgttcactggttgct
aagagcgcgtctattcagacagtagtatgctttccatatgcaggaggtgtgattgagctt
ggtgtgactgatttggtatcgaaagaccccggtcttattcatcgtgttaaaagtttgttg
ttggatgctccggagacgataacagggaacatcaatgatgttgcttgtccaggtcttggt
ccgaacgaaattgagtccgaattgagtccgtttttaggctgtgaacaactagaaagaggt
tctccaaacgagatttcggatggttttgagcctaaccaaccagcagaagatccgttcgtg
aatggtggggcttctcaggtgcaaagttggcaattcatggatgaccaccattctttgaat
acaagtgactgcatatctcaaaccttttctgatcatgaagatgttgttcctctgtgccag
ggtgaaaatgataatgacaatgatttccgagatgtcgaagagtgtgatcgtataaaccgg
gctgcttttgatcctataagcgatgatatgcactaccgaaccgtcgtgtcggtcctatta
aagagctcgcaccagtttattctgggaccgcattttggaaactcgaacaaggaatccggg
ttcattagctggaagatgaatagctcagtgaaatatcggaaagcaaaggttgaaatccct
caaaagttattgaagaagatgttgtttgaagtccctcggatgcatgataaaggattgctt
aaatctccacaaggcggtgatggtgttggagatgcggtttggagaccagaagcggatgaa
ctttgtaaaagccacgtcttatcagagaggaggcgtcgggaaaaaataaacgaacgactt
atgatcctcaaatcattggtccctacgaatagcaaggctgataaagtttctatcttagat
gatacaatagagtacctacaagacctcgaaagaagagttgaagaattggaatgttgcaga
gaattaaccgagtctgagactaaaacgaaacagaaacatcatcgggatcgtgctgagcga
acatccagtaacaaagtcaccaacggaaacaaatcggcttcctcaaataaaaggaaagcg
tacgatattgaggaaacaaaacaggatatcgaccatgttgcatctaaagacggctcgacc
gaaaatctaaccgttagtacgaacaacaaggatttaacaatcgagtttaagtgtcgatgg
cgggatggaattctgttcgagataatggatgctctaagcgtacttgatttggattgccac
tctgttcaatcgtctaccatcgaagggattctttctgtgactataaaatcaaagtacaaa
ggatcaagtgttgcaaaaccagggacaatcaagcaagcattattacaaaaggttcaatct
ttaacctttgtgtaa
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