Gossypium hirsutum (upland cotton): 107904564
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Entry
107904564 CDS
T04793
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein GMI1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107904564
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107904564
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107904564
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107904564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
107904564
NCBI-ProteinID:
XP_016686463
UniProt:
A0A1U8JCQ4
LinkDB
All DBs
Position
D11:complement(1297475..1307945)
Genome browser
AA seq
1593 aa
AA seq
DB search
MENKDHFKGLKRRLAFDDEDSGEVRRFKVLLPNGTSVGLALKDSESEISFQGFIDLIKDA
YDMVKRQSGSFKRKRMIDWKNEKLCLEDINGVKTRSRIDLRRFKPHKCHILKLHDGSGKF
ANNFENMWDLTPDTDLLMELPEEYTFETALADLIDNSLQAVWLNDVNHRRLISVDVLESG
ISIFDTGPGMDNSDENSIVKWGKMGASLNRLYKQQAIGCKPPFLVPFFGMFGYGGPIASM
NLGSCVEVSSKTKQSKKVYKLRLAREALLGNSGSECSWSTDGGIRDPLDEEIKESPHGSF
TKVYSSVVILNPVVRNLDISKLQCKLKDIYFPYIQCDELSKVGRTITPVEFQVNGLDLTE
IQGGEIATTNLHSCNGPEFTLLMRFYLKKEKISTSASGSKAPQIANARLKCIYFPIRQGK
ENIERILESLDAEGCGVGENFENYSRVSIRRLGRLLPDARWTILPFMDFRQRKGDQSHLL
KRCCLRVKCFVETDAGFNPMPSKTDLAHHSPFSIALRNFGNRPQDKEKDVDIEIHRDGKQ
LTPLQLEREYREWLLLMHHRYDEEIDSGEDPPVLIVNPLNKKALGISSDVIRVHQALKRK
ELLWKSGQKIKVLKGAYAGCYKNNVYATIEYFLIEGFEGDSGGEARIICRPLGTENGCEL
SVKGGTPSLNIQDSLSLPISVIDSGKCIAINDSDWERQLEKHNQKTPSRIDLLNVKQCHW
LEIDGAFPTSLTIPAGRTPPEDIVAVFRPSSFEVSKVSNYLDQKDIVKTNLEMLMKVQYR
TENHRDAKHINSLRIAPSSFKGFHGLYKFPLGVKLPHLFQKAGAYTFSFSTEHSRCQNYN
LTITVVPSEEVGRWQLLGDTWFPSYSVRVGSCFPPLSIACYDIYDNRMSFTSIPNLKITL
GMNEYLNVDVVKMKPSLSSDKLAIVIEDVMVETNGLDSIRPNYAATLMIYIQDESTSIPL
ECQVTPGALHRIEVSSRLPGKQLLPGFVIEQFVLEMFDVHGNHVEEGLEVQFQLDGFSIP
GLIGSKHKVDNLGRIDLGGLLKVTAGYGKQVSLSILHGDKVNFKQAFQTEKRELRISSSI
PEHCLAGSTLENISFEVIDSKGDVDGTFHDDEKCGQFHTLVVKSESHQIDDSIRYAFKHG
CCNIASLPLPQIEGPLCFKAFHSRYTELYCDVEISLVHAPNVDTDENEVQSSDGKLMLLQ
NSPFFKNGNVGNLLALVKYDEGLKSELCKHGERVGKLENCLKTLNCWKTDIELYMSELQD
SLEPDLVNDLDCLSTKEEITKLIEGRGHSAASTLLCSIAQGHWMDVMQDVVGVVALLGTV
GSIKLSRILAEHLGEDQMVAVVCKSYEVARALEQYDHNGEIDSRLGLHAEATALSKSISG
RFLVVCLEDIRPYLGGVEVNDPQRKLILPAPRLLSGNYPPGFIGYAVNLVNLEHPHIDYR
TESGHGLRETLFYRLFSKVQVYETREEMENARNCITHGAVSLDGGILRKNGIMSLGFRNP
EIYFPVQITNVSPERKKIMEQIKEKQLELRTTLQGINVASEKLDRARHKFNRKQKQFQKY
LDNIDDAINDTVTPSTTPSQCTQRLGTPSKVII
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggaccattttaagggtctaaagaggcgtttggcttttgacgatgaagat
tccggcgaagttcgccgtttcaaagttttgttacccaatgggactagtgttggactagcg
ttgaaagactctgagtctgaaatctcatttcaaggtttcattgacttgattaaggacgct
tatgacatggttaaacgtcaatctgggtcgtttaaaaggaaacgaatgatagattggaag
aatgaaaagttatgtcttgaggatataaatggggttaaaactaggagcagaattgatttg
cggcgttttaaaccgcacaagtgtcatattttaaaacttcatgatggctctggaaagttc
gccaataattttgagaatatgtgggatttgaccccggatacagatttgttaatggagtta
ccagaagaatacacttttgaaactgctcttgcagatttgattgacaattccttgcaggca
gtgtggttgaatgatgtaaaccataggagattgataagtgtggatgttcttgagagtgga
atctcaatttttgacactggacctggaatggacaacagtgatgaaaactctattgtgaag
tggggaaagatgggtgcctcgctaaacaggttatataaacaacaggcaatagggtgcaag
ccaccattcttagtgcccttttttggcatgtttggatatggaggacctattgcatctatg
aatctagggagctgtgttgaagtctcttccaagacaaaacaatccaagaaagtttacaag
ttacgtcttgcacgagaggctttacttggcaattctggctctgaatgtagttggagtact
gatggaggcattagggatcctcttgatgaagaaatcaaggagtcaccccatgggagcttt
acaaaggtttactcttctgtggtgatattaaatcctgtagtgagaaacttggacatatct
aagctccaatgtaagctgaaagacatatacttcccatatattcagtgtgatgagttgtcc
aaggttggcaggactattacacctgttgagttccaggttaatggtcttgatttaactgaa
attcaaggcggtgaaattgcaaccaccaacttgcattcttgcaatggtcctgagtttact
ctattaatgcgcttttaccttaagaaggagaaaatttcaaccagtgcttcaggttcaaag
gctcctcaaatagcaaatgcacgcctcaaatgtatttattttcctatccgtcaggggaag
gagaatattgagaggattttggagagtttggatgctgaaggatgtggagttggagaaaac
tttgagaattatagtcgtgtctcaattcgtcgacttggtcgtctacttccagatgctcgt
tggacaatacttccttttatggatttcaggcagagaaagggagatcagtctcacttgttg
aaacgatgttgcttgagagttaaatgctttgttgagactgatgctggatttaatccaatg
ccttcaaaaactgatttggcacaccatagtcctttctccattgctctaaggaactttggc
aataggcctcaggacaaagaaaaagatgttgatattgaaattcatagagatggaaaacag
ttaacacctttgcaactggaaagggagtaccgggaatggcttcttctaatgcatcatagg
tatgatgaagaaatcgactctggtgaggatccgcctgttcttattgtcaatcccttgaac
aagaaggcactaggaatatcatctgatgttataagggttcatcaagctctaaagagaaag
gaattattgtggaaaagtgggcagaaaatcaaagttctcaagggtgcatatgcagggtgt
tataagaacaacgtctatgctacaatagaatatttcttgattgaaggatttgagggggat
tctggtggagaagctcggattatatgcaggccactaggtacagaaaatggttgtgaactt
tctgtaaagggtggaacacccagtttaaatattcaggattcattgtctcttccaattagc
gtgattgattcgggaaagtgcatagccattaatgattctgattgggagcgtcaacttgag
aaacacaaccagaagactccctcaagaattgatctgctcaatgtgaaacaatgtcattgg
ttggagatcgatggggcttttccaaccagtctaacgatacctgctggacgaacccctcca
gaggacattgttgctgtttttcgcccgagtagtttcgaggtttctaaggtttcaaattac
ttggaccagaaggacattgtgaagactaatttagagatgttaatgaaagtacaatataga
actgagaaccatcgagatgctaaacatattaactcgcttcgcatagcaccttcatctttc
aaagggtttcatggcttatataaatttccacttggggttaagctccctcacttgtttcag
aaagcaggtgcatatacattttcattctccactgaacattctcgttgtcagaattacaat
ttaacaataacggtggttccttcagaagaggttggaaggtggcagctactgggtgataca
tggtttccatcttatagtgtaagggtcggttcatgttttccacccctctctattgcatgc
tatgacatatatgacaaccgaatgtcatttacctccattcctaacttaaagatcactctc
ggtatgaatgaatatttgaatgttgatgtggtcaagatgaagccatccctttcgtctgat
aagttggccattgttatcgaggatgtcatggttgaaactaatgggttagactcaatccgg
ccaaattatgcagccaccttgatgatatatattcaagatgagtcgacatcaattcctttg
gaatgtcaagttactcctggagctttacaccgtatcgaagtcagttcacgacttcctgga
aagcaattactcccaggttttgtaattgagcagtttgtgctagagatgttcgatgtgcat
ggaaatcatgttgaagaaggattagaagttcaattccaattggatggttttagcatccca
ggtctaataggctcaaagcataaggtggataaccttggacgtattgaccttgggggccta
ctgaaagtaactgcaggttatggaaaacaagtgtctctatctattttacatggtgataaa
gtaaatttcaagcaagcatttcaaaccgagaaaagggagctacgaatatcatcaagtata
cctgagcactgccttgctggttctacactggaaaatataagttttgaagttatagactcg
aagggggatgttgatggaactttccatgatgatgaaaagtgtggccagttccatacactc
gtagttaagtcggaatcacatcaaatagatgattccattcgctatgcattcaagcatggc
tgctgcaacatagcttctttaccccttcctcaaattgaagggcccctttgcttcaaagct
tttcattctcgatacactgagctatattgcgatgttgagatttctcttgttcatgctcca
aatgttgacaccgatgagaatgaggtccagtcttcagatggaaagctgatgctcctgcag
aattcaccgtttttcaagaatggcaatgtaggaaacctactggccctagtgaaatatgac
gagggactaaagagtgaattatgcaaacatggtgagcgtgttggaaaattggaaaattgt
ctgaagactcttaattgctggaagacggacatcgagctctatatgtctgagttgcaagat
tctctggaacctgatttagtgaacgatctggactgtttgtccacgaaagaagaaataaca
aagctgatcgagggaagaggtcattctgcagcttctactcttctctgcagtattgctcaa
ggacattggatggatgtcatgcaagatgtagtaggtgttgtagccctactcggaacagtt
ggctccattaagctaagcaggattttagctgagcacttgggtgaagatcaaatggttgct
gttgtgtgcaaatcctatgaagtagcacgtgccctcgagcagtatgaccataacggagaa
attgattctcggcttggtctgcacgcagaagctactgcacttagtaaatctataagtggc
agatttcttgtagtatgccttgaagatataaggccttatctaggaggggttgaagtcaat
gaccctcaaaggaagctaatcttaccggctcctcggttactaagtggaaactaccctcca
ggttttattggctatgcggttaatttggttaacttagagcaccctcatatagattacagg
accgaatctggccacggtctgcgtgagactctgttctacagacttttcagcaaggttcaa
gtgtatgaaacaagagaagagatggaaaatgctcgtaattgcataacacatggcgctgtg
tctctggacggagggattctgagaaagaatggcattatgtctctcggattcaggaacccc
gaaatatatttccctgttcagatcacgaacgtctctccagaaagaaagaaaatcatggaa
caaatcaaggaaaaacaattggagctaagaacaactttgcaaggcatcaatgtagcaagc
gaaaaacttgatcgagctcgccataagttcaacaggaaacaaaagcaatttcagaagtac
ttggataacatcgatgatgcaatcaacgataccgtaactccgagtacaaccccatcgcaa
tgcacccaacggctcggaactccctccaaggtgattatataa
DBGET
integrated database retrieval system
