Gossypium hirsutum (upland cotton): 107907128
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Entry
107907128 CDS
T04793
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00906
Carotenoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
107907128
Enzymes [BR:
ghi01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
107907128
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
FAD_binding_2
GIDA
FAD_oxidored
Ribosomal_L28
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
107907128
NCBI-ProteinID:
XP_016689856
UniProt:
A0A1U8JHW0
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Position
D05:2760164..2764564
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AA seq
535 aa
AA seq
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MCLLVSMVITMECVGARNFAAMAVPTRAFWKANLMRTKTAIPSHNRLISLKVRASGARNE
SCVAVKEDFADEEDFIKAGGSEILFVQMQQNKEMDKQSKLADKLPPISTGENVLDLVVIG
CGPAGLALAAESAKLGLNVGLIGPDLPFTNNYGVWEDEFKDLGLERCIEHVWRDTIVYLD
DDKPIMIGRAYGRVSRYLLHEELLRRCIESGVMYLNSKVETIVEATDGHNLVVCEHNRVV
PCWLATVASGAASGKLLQYEVGGPRVSVQTAYGVEVEVDNNPYDPSLMVFMDYRDYAKQE
VQSLEAQYPTFLYAMPMSSTRVFFEETCLASKDAMPFDLLKKKLMSRLESMGIRILKVYE
EEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPNYASVIANILKKDNS
NGLLTSERNNGNISMQAWDTLWPQERKRQRSFFLFGLALILQLDIEGIRTFFHTFFRLPS
WMWQGFLGSNLSSADLILFAFYMFVIAPNDMRMSLVRHLISDPTGATMIRTYLTI
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttattagtttcgatggtgataacaatggagtgtgtcggagctcggaacttcgcg
gcaatggcggttcctacacgtgccttttggaaagcaaatctgatgaggactaaaacagcg
attccaagtcataatcggcttatttccttaaaggtgagagctagtggagcaaggaacgag
agttgcgttgcggttaaagaagatttcgccgacgaagaagatttcataaaggccggtggc
tctgagattctctttgttcaaatgcaacaaaataaagaaatggataaacagtcgaaatta
gcggataagttaccgcccatatcaactggggaaaacgtattggacctggtagttattggt
tgtggtccggctggtcttgctcttgctgcagagtctgctaagttgggtttaaatgttgga
ctaattggccctgatcttccttttaccaataattatggagtatgggaagatgagtttaaa
gatcttggccttgaaagatgtattgagcatgtttggcgggacaccatagtataccttgat
gatgataagcctattatgattggtcgtgcttatggacgtgttagtcgatacttgctccat
gaggagttgttgaggaggtgtatcgagtcaggtgtaatgtatcttaactcgaaggtagag
acgattgttgaagctaccgatggtcataatcttgtagtttgtgaacacaatcgtgtcgtt
ccttgctggcttgctactgttgcttcaggagcagcttcaggtaaactgttgcaatatgag
gtagggggtccaagggtctctgttcaaacagcttatggcgtcgaggttgaggtggataac
aatccttatgatccaagcctgatggttttcatggattacagagactatgctaaacaagaa
gttcaatctttagaagcacaatatccaacatttctttatgccatgcccatgtcttcaaca
agagttttttttgaggaaacttgtttggcctcaaaagatgccatgccttttgatttatta
aagaagaagctcatgtcaaggttagagagcatgggaatccggattttaaaagtttatgaa
gaggagtggtcttacatcccagttggtggttccttgccaaacacagagcagaagaacctt
gcatttggtgctgcagcaagcatggtgcatccagctactggttattcggttgtcagatca
ttgtcagaggctccaaattatgcttctgtaattgcaaatatcctaaagaaggataattct
aatggcttgcttaccagtgaaagaaataatgggaatatctcaatgcaagcttgggatact
ctttggccacaagaaaggaaacgccagaggtcattctttctctttgggctagcactcata
ctgcaactagatattgaaggcattcgaacattcttccatacattcttccgtttgccaagt
tggatgtggcaaggatttcttggttctaatctttcctctgccgatctcattctgtttgcc
ttttatatgtttgtcatagcaccaaacgatatgagaatgtcccttgtcaggcacttaatc
tcagatccaactggagcaactatgataagaacatatctcacaatatag
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