Gossypium hirsutum (upland cotton): 107910479
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Entry
107910479 CDS
T04793
Name
(RefSeq) tRNA pseudouridine(38/39) synthase
KO
K01855
tRNA pseudouridine38/39 synthase [EC:
5.4.99.45
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107910479
Enzymes [BR:
ghi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.45 tRNA pseudouridine38/39 synthase
107910479
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
107910479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Rab11-FIP3
Myo5a
Motif
Other DBs
NCBI-GeneID:
107910479
NCBI-ProteinID:
XP_016693821
UniProt:
A0A1U8JU69
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Position
D02:complement(9776455..9783737)
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AA seq
445 aa
AA seq
DB search
MLNGISESGSDVVGSFISQLQAFQNRVKELEAENSKLSSQISKCCCHKTEEMQNGSDVES
FKQGVESQRKNAGGDKTRKKKTIERNPGYDLKIMTHHSKRYVALRVMYFGQRFYGFASEA
QMDPTVESEIFKALEKTRLLVGDRKESQYSRCGRTDKGVSSVGQVIALFLRSNLKETDGN
HKISGELIPEAQIEGEIDYVRVLNRVLPSDIRILGWSPVSIDFSARFSCLAREYKYFFWR
GNLNLSAMENAGKKFLGEHDFRNFCKMDAANVHNYRRRITQFEISSSNMSFEGGQLCAIK
VKGSAFLWHQVRCMVAVLFMIGQGLESVDVIDILLDIEKTPRKPQYAMAPETPLILQSCE
FEDVKFICSSDSGQALRIHLENEGRAYQLQSAIFQEAALSCLPLAKDQSLFNDGTIKKVT
SHISLLCRPTEPSYEERRGKLNSRR
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacggaataagcgagtccggcagtgatgtcgtgggtagcttcatatcccaacta
caggctttccaaaatagagtgaaggaattagaggctgagaattcaaagctatcttctcaa
atctccaaatgttgttgccataagacagaggagatgcaaaatggttctgatgttgaaagc
tttaaacagggtgtggaaagtcagagaaaaaacgctggaggtgataagaccagaaaaaag
aaaacaatagaaagaaatccaggttatgatttgaaaattatgactcaccattccaagaga
tatgttgctttaagagtcatgtattttggtcagaggttttatggttttgcttcagaagca
caaatggatcccactgttgagtctgaaattttcaaagcacttgagaaaacaaggctttta
gttggtgacaggaaggaatcacagtactcaaggtgtggcagaacagataagggggtgtcc
tctgttggccaagtgattgcattgtttttaaggtcaaacctcaaagaaactgatggaaac
cacaaaatttcaggagaattaattcctgaggcacaaattgaaggagaaattgattatgtg
agagtactgaaccgagtccttccaagtgatattcgaattttaggatggagtcctgtttca
attgatttcagtgcaaggtttagttgtttggctagagaatataagtacttcttttggaga
ggaaatttgaatctctccgctatggagaatgcaggaaagaaatttcttggagaacatgac
ttcagaaacttttgtaagatggatgcagcaaatgtacacaactacaggcgtcgtattaca
cagtttgaaatttcttcttctaatatgagctttgaaggcggtcagctttgtgctattaaa
gttaaaggtagtgccttcctgtggcatcaggtgcggtgcatggttgctgtgctatttatg
ataggccaaggtcttgaatcagttgatgtgatagatatattactggacattgagaagaca
ccgagaaaacctcagtatgccatggctccagagaccccattgatccttcaatcctgtgaa
tttgaagatgtcaagtttatttgctcctcagattctgggcaagcacttcgtatacacttg
gaaaatgagggtcgagcataccagcttcagtctgcaatttttcaagaagctgctctgagt
tgcttgcctttagcaaaagaccagagcttatttaatgatggaacaatcaagaaggtcact
tcccatatttctctcttgtgtcggccaactgagccatcatacgaagaacgacgtggcaaa
ctgaattcaagaagatga
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