Gossypium hirsutum (upland cotton): 107912232
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Entry
107912232 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107912232
KO
K12126
phytochrome-interacting factor 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107912232
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107912232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107912232
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107912232
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
TPP_enzyme_N
Motif
Other DBs
NCBI-GeneID:
107912232
NCBI-ProteinID:
XP_016695804
UniProt:
A0A1U8K599
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Position
D11:10175423..10178139
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AA seq
558 aa
AA seq
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MAEKQTPESIPRRITTLFPNLSSMCDPNFVEHAWENDQNLIRGLSSKIPKKNFPGSGYFS
QSSKARIQHEGETPTVNTSKHGVADSTSTYGDPLSSITKTNRLNHHHHENYITSLQTGYR
ELLFEDGFNVALEADQKCYDQQLLDSNIVPTNKYKNFKQSNVLDVPELVHEIPQQTMNND
SQLPQPQPETCIPFMRSKDKYSRIDEKSERANFSIFLNSPALPKSNQIPCCGVTIPRSTS
GLAVEEDDDLEANARSIPFAKEAKSMKPILPDYEPEKEWVVPDEQSEAVGFNDNMRLPSS
RVGGTSSGLAPNTIMKGKVVEQKVASSSVCSRGASNCPVNTFERRYEDTDLSDNDELEEA
HETTKATPSKGSKRKRKSELHKLCERRRRDKINEKMRALQELIPNCNKVDKASMLDEAID
YLKTLQLQVQMMSMGTAGVYMPPMMLPASSMQHINARQLGGYSPMAMGMGMQMGLGCTTA
TQFPSVTSLMPGIMQARFNMLGLPRQVLLMSRSPFASLAATFPPQSVRTSSVSQALAAVP
LTTSKDSNPALQLKTRNA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaacagacccctgaatcaatccctcgcaggatcacaaccctcttccctaat
ttatcatccatgtgtgatccaaatttcgtggagcacgcatgggagaatgatcaaaatctg
attcgaggtttgtcgtcgaagatacctaaaaagaatttcccaggctctggttatttttct
caatcttctaaggctcgaattcaacatgaaggagaaacccctacggtgaatacatcaaag
cacggggttgcagattccactagtacgtatggcgatcccttatccagtatcactaaaacg
aatcgccttaatcatcatcatcatgagaattacataacttctctgcaaactgggtaccgg
gaactactattcgaggatggtttcaatgttgccttggaagccgaccaaaaatgctacgat
cagcaactcctagattccaatattgttcctacaaacaaatacaagaattttaaacaaagc
aacgtgctggacgtgcccgagctcgtacacgagattcctcaacaaactatgaataacgat
agccaactaccacagccacaacccgaaacttgtattccatttatgagatcaaaggacaaa
tattcaaggatcgatgagaaaagtgagagggcgaacttttccatcttcttaaactctcca
gctcttcctaaatccaaccagattccatgctgtggtgtaacaataccaaggagcacttca
ggtttagctgttgaagaagatgatgatttagaagccaacgccagatctattcctttcgca
aaagaagcaaaatccatgaagccaatattaccagattatgagcctgaaaaggagtgggtt
gttcctgatgagcagtccgaagccgttggctttaacgataatatgaggcttccttcttct
agggttggtggtacatcctcaggcttggcaccaaatacaatcatgaaaggaaaagttgtc
gagcaaaaggttgcatcgtcttcagtgtgctcgcgtggggcttcaaattgtccagttaac
acttttgaaaggagatacgaagatactgatctcagtgataatgatgaattggaagaagct
catgagacgacaaaagcaacgccaagcaaaggctctaagagaaagagaaaatctgaactt
cacaagctatgtgaaaggaggcgaagggataaaatcaatgaaaagatgcgtgcattgcaa
gagctcattcccaattgtaataaggtggataaagcttcaatgcttgatgaagcaattgat
tacttgaaaacgcttcagctccaagtccagatgatgtcaatgggaactgctggcgtttat
atgcctccaatgatgttaccagcttcgtcaatgcaacatataaatgcacgacaattgggt
ggttattctcccatggccatgggaatgggaatgcaaatgggtctaggctgcaccacagca
acacaatttccatccgtaacttcactaatgcctgggatcatgcaagctagatttaacatg
cttggcctccctcgccaagttttattaatgtcgcgttcacctttcgcatccttggctgca
acatttcccccacaatcggtccgaacctcttccgtttctcaagctcttgccgctgttcct
ctgactacatcaaaggattcaaacccagcacttcaactaaaaacaagaaatgcttaa
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