Gossypium hirsutum (upland cotton): 107913394
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Entry
107913394 CDS
T04793
Name
(RefSeq) very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase PASTICCINO 2
KO
K10703
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:
4.2.1.134
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00062
Fatty acid elongation
ghi01040
Biosynthesis of unsaturated fatty acids
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01212
Fatty acid metabolism
Module
ghi_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
107913394
01040 Biosynthesis of unsaturated fatty acids
107913394
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107913394
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.134 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase
107913394
Lipid biosynthesis proteins [BR:
ghi01004
]
Fatty acid synthase
Component type
107913394
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PTPLA
Motif
Other DBs
NCBI-GeneID:
107913394
NCBI-ProteinID:
NP_001314011
UniProt:
V5M181
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Position
A11:complement(55409834..55412916)
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AA seq
221 aa
AA seq
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MASALTVLRRLYLSIYNWLVFIGWFQVLFLALKALKESGHEHVYNAVEKPLLLAQSAAVM
EILHGLIGLVRSPVSSTLPQIGSRLYLTWGILWSFPEIRTHILVTSLVISWAITEIIRYS
FFGMKEAFGFAPSWHLWLRYSTFLVLYPTGISSEVGLIYFALPYIKASEKYCFRMPNKWN
FSFDYFYAAILALGIYVPGSPHLYRYMLGQRKRALSKSKKE
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggctttgactgttctcaggcggctctacctttccatctacaattggctcgtc
ttcatcggctggtttcaggttctgtttttagcgttaaaggctttgaaagaatcaggtcat
gaacatgtctataatgctgtcgaaaagcctctccttctagctcaatccgctgccgttatg
gagattcttcatggcttaataggtctggttagatcaccggtgtcatcaactctgccgcag
ataggatcaagattgtatttaacttggggaattttatggagttttcctgagattcgaact
cacattcttgttacttcgttggtcatcagttgggccattacagagattatacgctattca
ttctttggcatgaaggaggcctttggttttgcaccttcatggcatttgtggcttaggtat
agcacattcttggttttgtatccaactggcatcagcagtgaagttggtctgatctacttt
gccttgccatatatcaaggcttcggagaagtattgctttagaatgccaaacaagtggaat
ttctcctttgattacttctatgctgcaattcttgcccttggaatctatgtcccaggtagt
cctcacttgtaccgttatatgctcggacagaggaagagagcactttccaaatcaaaaaag
gagtga
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