Gossypium hirsutum (upland cotton): 107918164
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Entry
107918164 CDS
T04793
Name
(RefSeq) BRISC and BRCA1-A complex member 2 isoform X1
KO
K12173
BRCA1-A complex subunit BRE
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107918164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107918164
03036 Chromosome and associated proteins [BR:
ghi03036
]
107918164
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107918164
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107918164
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
107918164
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
107918164
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
107918164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
107918164
NCBI-ProteinID:
XP_016703184
UniProt:
A0A1U8KR45
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Position
D01:17413654..17417163
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AA seq
394 aa
AA seq
DB search
MSLDGFPPFISAQLHYLINHFPDKIKVEQVLSGGKTYTGGLDRFTLLIPYCLDYIKWDII
YNAEFPLAPPDIIFGTEDEDFHPLHMTGRVGEGDLKFRNILSDWNYKDPTRLLALIQELR
DRYMAYQKKRVGEVDDDRLTFEISTICSREGIEMQISSGAEKPEEVKFAVPLMDMNINKM
VHGCPWRHPQKICLQVIYPVGKKYASTPSAPRLKLMSTTELRALFTIEDVKLPSWLDGMC
MAEYLPHLEESLQKQVLEAVSLIDIRRHFIEALAPLFGRPLEADPVFCRKATFLASSGSF
VFLVHFHISTLFPKQQPALMLQSSQFLYSLENMNIDCLLQHISPQGIPKKSPLLAEYPWS
PRWEASQMAERIFDFLADESLNFKRFCNESQPQH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatggcttccctccattcatttcagctcagctccattatctcatcaatcac
tttcccgacaaaatcaaggttgagcaagtgctgtctggtggaaaaacctacaccgggggc
ctagatcgatttacattgcttattccatattgcttagactatattaaatgggatattata
tacaatgcggagttcccattggctccaccggatataatatttggaactgaagatgaagat
tttcacccactacacatgactggccgtgtaggagagggggacttgaagtttcggaacatt
ttgtctgattggaactataaagacccgacaaggctactagctttaattcaggaattgagg
gaccggtatatggcctaccagaagaaacgtgttggagaagtggatgatgataggttgaca
tttgagattagcactatttgttctcgagagggaattgagatgcaaattagttcaggtgct
gaaaagccagaagaggtcaaatttgctgtgcctctaatggacatgaacataaacaaaatg
gtgcatgggtgcccctggagacatccacaaaagatatgcttacaggtaatatatcccgtt
ggaaaaaagtatgcatctactccttcagcacctcgtctgaaattgatgtcaactactgag
ctgagagctctgtttacaatcgaggatgtcaagcttccttcatggttggatggaatgtgc
atggctgaatatcttcctcatctagaagaatctcttcagaaacaggtcctggaagctgtt
tcattaattgacataagaagacactttatagaagcattagccccattgtttggaagacct
ttggaagctgatccggtcttttgcagaaaggcaacatttcttgcttcctctggatccttt
gttttcctggtgcacttccatatttcaactctgtttcctaagcagcagccagctctgatg
ctccaaagttctcagtttctctactcgttggagaacatgaacatcgactgtctattgcag
catatatcgccacaaggaataccgaaaaagtcacctcttctagcagaatatccatggagt
ccgagatgggaagcatcacaaatggcggagcggatattcgatttcttggcggatgagtct
cttaacttcaaacggttctgtaatgagtctcaacctcaacactag
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