Gossypium hirsutum (upland cotton): 107920734
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Entry
107920734 CDS
T04793
Name
(RefSeq) probable UDP-3-O-acyl-N-acetylglucosamine deacetylase 1, mitochondrial isoform X1
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00540
Lipopolysaccharide biosynthesis
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
107920734
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ghi01005
]
107920734
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
107920734
Lipopolysaccharide biosynthesis proteins [BR:
ghi01005
]
Lipid A
107920734
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GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-GeneID:
107920734
NCBI-ProteinID:
XP_016706061
UniProt:
A0A1U8KUB2
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Position
D13:complement(47739527..47744846)
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AA seq
204 aa
AA seq
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MRISATINSFKSSNIISWKTTGKLQQTLVGCIELSGKTLQSGKVSKVKIWPGFTGQGRYF
EFHSNLIPASIDFVRELLLCTSLCKDGYKIRTVEHLLSALEAKGIDNCRIQIQSLDSEDT
EVEVPIFDGSANAWVEAIEQVGRKEALDRCGNNVEKLAPYLSEPFYVSRNDSFMVAFPAS
KVHISCGIDFPKGLWDVENDNDGQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatctccgccacgattaactcattcaagtcctccaatatcatctcatggaaaacg
accggtaagcttcaacaaaccctagtgggatgcatcgaactgtcgggaaaaacacttcag
tcggggaaggtttcgaaggtaaagatatggccgggattcaccggccaaggaaggtacttt
gagtttcactcaaatttgattcctgcatccatcgattttgttcgagaattgctattgtgt
acctctctttgcaaagacggatacaagattcggaccgtcgagcatttgctttcggctttg
gaagctaaaggcattgacaattgtagaattcagattcaaagtctcgattctgaggatact
gaggtcgaggttcctatttttgatgggtctgcaaatgcttgggtagaggcaatagaacaa
gttggcagaaaagaggccttggatcggtgtggcaacaatgttgagaaattggcaccatat
ttgagtgaaccattttatgtttcgagaaatgattcttttatggttgccttccctgcttca
aaggttcacatatcttgtggaattgactttccaaaggggctttgggatgtagaaaacgac
aatgatggccaataa
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