Gossypium hirsutum (upland cotton): 107922999
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Entry
107922999 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107922999
KO
K12126
phytochrome-interacting factor 3
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107922999
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107922999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107922999
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107922999
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
TPP_enzyme_N
Motif
Other DBs
NCBI-GeneID:
107922999
NCBI-ProteinID:
XP_016708687
UniProt:
A0A1U8L245
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Position
A11:11126790..11129487
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AA seq
564 aa
AA seq
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MAEKQTPESIPRRITAPFPNLSSMCDPNFVEHAWENDQNLIRGLSSMMPKKNFPGSGYFS
QSSKARIQHEGETPTVNTSKHWVADSTSTYGDPLSSIAKTNRLNHHHHENYITSLQTGYR
ELLFEDGFNVALEADQKCYDQQLLDSNIVPTNKYKNFKQSNVLDVPELVHEIPQQTMNND
SQLPQPQPETCIPFMRSKDKYSRIDEQSERANCSIFLNSPALPKSSQIPCCGVTIPRSTP
GLAVEEDDDLEANARSVPFAKEAKSMRLILPDYEPEKEWVVPDEQSEAVGFNDNMRLPSS
RVGGTSSGLAPNTIMKGKVVEQKVASSSVCSRGASNCPVNTFERRYEDTDLSDNDELEEA
HETTKATPSKGSKRKRKSELHKLCERRRRDKINEKMRALQELIPNCNKVDKASMLDEAID
YLKTLQLQVQMMSMGTAGVYMPPMMLPASSMQHINARQLGGYSPMAMGMGMGMQMGLGCT
TATQFPSITSLMPGIMQARFNMLGLPRQVLLMSPSPFASLAATFPPQSVRTSSVSQALAA
VPLSTSKDSNPTLQLKKKKCLMKS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaacagacccctgaatcaatccctcgcaggatcacagcccccttccctaat
ttatcatccatgtgtgatccaaatttcgtggagcacgcatgggaaaatgatcaaaatctg
attcgaggtttgtcgtcgatgatgcctaaaaagaatttcccaggctctggctatttttct
caatcttctaaggctcgaattcaacatgaaggagaaacccctacggtgaatacatcaaag
cactgggttgcagattccactagtacgtatggcgatccattatccagtatcgctaaaacg
aatcgccttaatcatcatcatcatgagaattacataacttctctgcaaactgggtaccgg
gaactactattcgaggatggtttcaatgttgccttggaagcagaccaaaaatgctacgat
cagcaactcctagattccaatattgttcctacaaacaaatacaagaattttaaacaaagc
aacgtgctggacgtgcccgagctcgtacacgagattcctcaacaaactatgaataacgat
agccaactaccacagccacaacccgaaacttgtattccatttatgagatcaaaggacaaa
tattcaaggatcgatgagcaaagtgagagggcgaactgttccatcttcttaaactctcca
gctcttcctaaatctagccagattccatgctgtggtgtaacaataccaaggagcactcca
ggtttagctgttgaagaagatgatgatttagaagccaacgccagatctgttcctttcgca
aaagaagcaaaatccatgaggctaatattaccagattatgagcctgaaaaggagtgggtt
gttcctgatgagcagtccgaagccgttggctttaacgataatatgaggcttccgtcttct
agggttggtggtacatcttcaggcttggcaccaaatacaatcatgaaaggaaaagttgtc
gagcaaaaggttgcatcgtcttcagtgtgctcgcgtggggcttcaaattgtccagttaac
acttttgaaaggagatatgaagatactgatctcagtgataatgatgaattggaagaagct
catgagacgacaaaagcaacgccaagcaaaggctctaagagaaagagaaaatctgaactt
cacaagctatgtgaaaggaggcgaagggataaaatcaatgaaaagatgcgtgcattgcaa
gagctcattcccaattgtaataaggtggataaagcttcaatgcttgatgaagcaattgat
tacttgaaaacgcttcagctccaagtccagatgatgtcaatgggaactgctggcgtttat
atgcctccaatgatgttaccagcttcgtcaatgcaacatataaatgcacgacaattgggt
ggttactctcccatggccatgggaatgggaatgggaatgcaaatgggtctaggctgcaca
acagcaacacaatttccatccataacttcactaatgcctgggatcatgcaagctagattt
aacatgcttggcctccctcgccaagttttattaatgtcgccttcacctttcgcatccttg
gctgcaacatttcccccacaatcggtccgaacctcttccgtttctcaagctcttgccgct
gttcctctgtctacatcaaaggattcaaacccaacacttcaactaaaaaaaaagaaatgc
ttaatgaagagttag
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