Gossypium hirsutum (upland cotton): 107924960
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Entry
107924960 CDS
T04793
Name
(RefSeq) lactosylceramide 4-alpha-galactosyltransferase-like
KO
K01988
lactosylceramide 4-alpha-galactosyltransferase [EC:
2.4.1.228
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
ghi00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
107924960
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
107924960
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107924960
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.228 lactosylceramide 4-alpha-galactosyltransferase
107924960
Glycosyltransferases [BR:
ghi01003
]
Glycan extension
P blood group
107924960
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gb3_synth
Gly_transf_sug
Caps_synth
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
107924960
NCBI-ProteinID:
XP_016711028
UniProt:
A0A1U8LCC9
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Position
A10:complement(2182087..2183725)
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AA seq
433 aa
AA seq
DB search
MFQMSKLYHNFHHTKNSVFSFVFLLPLFLLLLLACNGFSVFYINLSVPAKTSPEPANLLL
EILPGDKPVKKLSSSSVMYAVKEENPSLNLKTHLSLLQNPNISMVLKPKKQPHRFSPQTL
KALQLRTTKTAKGFTFSTKLRAFFQNSNCKLRFFMTWISSLHSLSHRELLVIESVFKSNP
KACLVIVSTSLDSPKGNAVLKPFLNMGFNLITVSPDFGSIFKHTYAETWFNRLKTGNINP
GEVSLGQNLSNLLRLVLLYKYGGVYIDTDVIVLKSFNNLSNVIGAQSMKIETKTWSRLNN
AVLIFDKHHPLLYKFIQEFALTFDGNKWGHNGPYLVSRVVGRVTNGPEFNFTVLPPPAFY
PVDWSRIRSLFRGPNNWIQSDWLRRKLEQIRRQSYTVHLWNRQSKDVRVEEGSIVHHIIS
DCCIFCNISTSSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaatgtctaaactttaccataatttccatcataccaaaaattcagtctttagc
tttgtgtttttattaccacttttccttcttcttcttttagcttgtaatggcttctctgtt
ttctacattaacctctctgttcccgccaaaacttcaccggagcccgccaatttgttactg
gagatccttcccggtgacaaaccggtgaaaaaattatcatcttcctcagttatgtatgca
gtgaaagaagagaacccatctttaaatttaaaaacccatttatctcttttacaaaacccc
aacatttcaatggttttaaagccaaaaaaacaacctcatcgttttagtcctcaaacattg
aaggctttgcaattaaggacaacaaaaacagcaaagggtttcactttctccaccaaatta
agggcttttttccaaaattcaaactgtaagcttcgttttttcatgacatggatttcatca
ttacattcattaagtcatagagaattacttgtcattgaaagtgtgttcaaatcaaacccc
aaagcttgtcttgtcattgtatccacttcattagattccccaaaaggaaatgctgtttta
aaaccatttttaaacatggggtttaatttaatcactgtaagtcctgattttggttctata
ttcaagcacacatatgcagaaacatggtttaatcgattaaagacaggcaatatcaatcca
ggtgaggtttctttaggacaaaacctgtctaatctactccgattggtcttgttatacaaa
tacggcggcgtttatatcgacacagatgttattgttttaaaaagtttcaacaatttgagc
aatgtgattggtgcacagtccatgaaaattgagaccaaaacttggagtagattaaacaat
gctgtgttgatttttgataaacatcatccattgttgtacaaattcatacaagaatttgca
cttacttttgatggtaataaatggggtcacaatggtccttatttagtttcaagggtagtt
ggtagagttaccaatgggcctgaatttaacttcaccgtgttgccaccgccggctttttat
ccggtcgattggagtcggatccgtagcttattccgagggcctaataattggattcaatcg
gattggttacgtcgtaaactcgagcaaatccgaagacaaagctatactgttcatctttgg
aacaggcaaagtaaggatgttagagttgaagaaggtagcattgttcatcatattatatca
gattgttgtattttttgcaatatttcaacatcaagtttgtaa
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