Gossypium hirsutum (upland cotton): 107926029
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Entry
107926029 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase, mitochondrial
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00020
Citrate cycle (TCA cycle)
ghi00785
Lipoic acid metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01200
Carbon metabolism
ghi01210
2-Oxocarboxylic acid metabolism
Module
ghi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ghi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
107926029
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
107926029
Enzymes [BR:
ghi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
107926029
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
107926029
NCBI-ProteinID:
XP_016712282
UniProt:
A0A1U8LCF7
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All DBs
Position
D04:complement(11477559..11483507)
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AA seq
1023 aa
AA seq
DB search
MGWLRAGSSVAKLAIRRTLSLGGSYAARSRIVPSQSRYFHTTVFKSKAQTAPVPRPVPLS
KLTDSFLDGTSSVYLEELQRAWEADPDSVDESWDNFFRNFVGQAATSPGISGQTIQESMR
LLLLVRAYQVNGHMKAKLDPLGLEEREIPDDLDPALYGFTEADLDREFFXGVWRMAGFLS
ENRPVQTLRSILTRLEQAYCGSIGFEYMHIADRDKCNWLRDKIETPTPMQYNRQRREVIL
DRLIWSTQFENFLATKWTTAKRFGLEGGETLIPGMKEMFDRAADLGVESIVIGMPHRGRL
NVLGNVVRKPLRQIFSEFSGGTRPVDEVGLYTGTGDVKYHLGTSYDRPTRGGKRIHLSLV
ANPSHLEAVDPVVVGKTRAKQYYSNDEDRTKNMAILIHGDGSFAGQGVVYETLHLSALPN
YTTGGTIHIVVNNQVAFTTDPRAGRSSQYCTDVAKALDAPIFHVNGDDVEAVVHACELAA
EWRQTFHSDVVVDLVCYRRFGHNEIDEPSFTQPKMYKIIRNHPSALQIYRNKLLESGQVT
DDDIGNISQKVSTILNEEFLASKDYVPKRRDWLSAYWTGFKSPEQISRVRNTGVKPEILK
NVGKAITTLPDNFKPHRAVKKVYEQRAQMIETGEGLDWAMGEALAFATLLVEGNHVRLSG
QDVERGTFSHRHSVIHDQETGEQYCPLDHVIINQNEEMFTVSNSSLSEFGVLGFELGYSM
ENPNSLVMWEAQFGDFANGAQVIFDQFISSGEAKWLRQTGLVVLLPHGYDGQGPEHSSAR
LERYLQMSDDNPFVIPEMDTTLRKQIQECNWQVVNVTTPANYFHVLRRQIHREFRKPLIV
MSPKNLLRHKDCKSNLSEFDDVQGHPGFDKQGTRFKRLIKDQNMHSDLEEGIRRLVLCSG
KVYYELDDERKKNNATDIAICRVEQLCPFPYDLIQRELKRYPNAEIVWCQEEPMNMGAYN
YIAPRLATAMTALGRGTFDDVRYVGRAPSASTATGFYSMHVKEQAELVQKAIQPEPIKTN
TTI
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcttagagctgggtcaagtgtggcaaagcttgctatcaggaggactttgtct
ctgggtggatcatatgctgcaagatcacgcattgttccttcacagagtcgatattttcac
accaccgtctttaaatcaaaggcacagactgctcccgttcctcgccctgttccactttct
aagctaactgatagtttcttagatggaaccagtagtgtatacttagaggagcttcaaagg
gcctgggaagctgacccagatagtgttgatgagtcgtgggacaatttcttcaggaacttt
gttggtcaggctgccacatctccagggatatcaggccagaccattcaggagagtatgcga
ttgttattgcttgtgcgggcttaccaggttaatggtcacatgaaagcgaagttggatccg
ttgggtttagaggaaagggaaattcctgatgatttggatccagctctttatggttttact
gaagctgatcttgatagagaattctttntaggtgtgtggaggatggctggatttttatca
gaaaaccgacccgtgcagacacttaggtcgattttgactcggcttgaacaggcttactgt
ggaagcattgggttcgagtacatgcacattgctgaccgcgacaagtgcaactggttgaga
gacaagattgaaactccaacaccaatgcagtacaatcgccagcggcgcgaagtcattctt
gataggcttatatggagtacacagtttgaaaatttcttggctaccaagtggacaacagcc
aagaggtttgggctagaagggggtgaaactttaattcctggaatgaaagagatgtttgat
agggctgctgatctaggggtcgaaagcatagttattggaatgcctcatagaggaagattg
aatgtgctaggtaatgttgtccgaaagccacttcgtcaaatatttagtgagttcagtggt
ggtacaaggcctgtggatgaagttgggctttacacaggaactggtgatgtcaaatatcac
ttgggaacttcctatgatcgaccaacaagaggtggaaagagaattcatttatctttagtt
gccaaccccagtcacttggaggctgtggacccagttgttgtcggaaaaactagagcaaag
cagtattactccaatgatgaggataggaccaagaacatggctattttgattcatggagat
ggaagctttgctggacagggtgttgtctatgaaactcttcatcttagtgcacttccaaac
tacactactggtggaactatacatattgtagtcaacaaccaagtggcatttacaactgat
ccaagggcaggaagatcttcccagtattgtactgatgttgccaaagctttggatgctccc
attttccacgtaaatggagatgatgttgaggcagttgtccatgcatgtgaacttgcagct
gagtggcgccaaaccttccattcagatgtggtggttgatttggtctgctaccgtagattt
gggcataatgagattgacgaaccatcatttacacagccaaagatgtataagatcattcgg
aatcacccctcagcacttcagatataccgaaacaagttgttggagtctgggcaggtgaca
gatgacgacattggtaatataagtcagaaggtcagtacaattcttaatgaagaattcttg
gccagcaaagattatgttcccaaaagacgggactggctttctgcttactggacgggattc
aagtcacctgaacaaatttcacgtgttcggaacactggggttaaacccgagatattgaag
aatgttggcaaagcaatcacaacccttccagataattttaagcctcatagagcggtgaag
aaggtttatgaacaacgtgcacagatgattgagacaggggagggccttgactgggctatg
ggtgaagcacttgcatttgcgaccttgctggtggaaggtaaccatgttaggttgagtggt
caggatgttgaaaggggtacattcagtcatcggcattctgtgattcacgaccaggaaaca
ggggaacagtattgccctctggaccatgttatcatcaaccaaaatgaggagatgtttact
gtcagcaatagttctctttctgagtttggtgtgcttggattcgaattgggttactcgatg
gagaatccaaattcattggttatgtgggaagctcagtttggtgactttgctaatggtgct
caagtgatatttgatcagtttataagtagtggggaggcaaagtggctgcgtcaaactggt
ctcgtagtgctgcttccccatggttatgatggacaaggtccagaacattcaagtgcacga
ctagagcgttatcttcagatgagtgatgacaatccttttgtgatacctgagatggataca
actcttcgtaaacaaattcaggagtgcaactggcaggtggttaacgttacaacacctgct
aattacttccatgttttgcggcgtcagatacacagggaattccgtaagcctcttatcgtg
atgtcccccaaaaacttacttcgtcacaaggactgcaaatcaaatctctctgaatttgat
gatgtccaaggccaccctggttttgataaacaaggaaccagatttaagcgacttataaaa
gatcagaatatgcactccgaccttgaggagggtatcagacggttggtactttgttccgga
aaggtgtactatgagcttgatgatgagcgaaagaagaacaatgctaccgacattgctatc
tgtcgtgtggaacagctttgcccattcccttatgacctaatccaacgagagcttaagcga
tatccaaacgcagagattgtttggtgccaggaagaaccgatgaacatgggtgcatacaac
tacatcgcccctcgtcttgccactgcaatgactgctttgggtagaggaacctttgatgat
gtcagatatgttggccgtgctccatctgcttccactgctaccggcttctattccatgcat
gtgaaggaacaagcggagctcgtgcaaaaggccattcaacctgaaccgatcaagaccaat
accactatctga
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