KEGG   Gossypium hirsutum (upland cotton): 107932188
Entry
107932188         CDS       T04793                                 
Name
(RefSeq) RING-box protein 1a
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03420  Nucleotide excision repair
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107932188
   04120 Ubiquitin mediated proteolysis
    107932188
  09124 Replication and repair
   03420 Nucleotide excision repair
    107932188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107932188
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107932188
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     107932188
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   107932188
  Multi subunit type E3
   SCF complex
    Ring finger protein
     107932188
   Cul2 complex
     107932188
   Cul3 complex
     107932188
   Cul4 complex
     107932188
   Cul7 complex
     107932188
   Cul8 complex
     107932188
   Cul9 complex
     107932188
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      107932188
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      107932188
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 107932188
NCBI-ProteinID: XP_016719629
UniProt: A0A1U8M245
LinkDB
Position
D07:1688881..1691145
AA seq 118 aa
MATLDSDVPMVPVGESSNSSAASSSTKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggctactctagactccgatgtccccatggtacccgtcggcgagtcttccaacagctcc
gccgcttcctcttccactaagaaacccaagcgtttcgagatcaaaaagtggagcgccgtt
gccctttgggcttgggatattgttgtggataattgtgcaatttgtaggaatcacatcatg
gatctctgtatcgaatgccaagcaaaccaagccagcgccaccagtgaggaatgcactgtt
gcttggggggtctgcaaccatgcatttcactttcactgtatcagccgatggttgaagact
cgtcaagtgtgtccattggataatagtgagtgggagttccaaaagtatggtcactaa

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