Gossypium hirsutum (upland cotton): 107932188
Help
Entry
107932188 CDS
T04793
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107932188
04120 Ubiquitin mediated proteolysis
107932188
09124 Replication and repair
03420 Nucleotide excision repair
107932188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107932188
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107932188
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107932188
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107932188
Multi subunit type E3
SCF complex
Ring finger protein
107932188
Cul2 complex
107932188
Cul3 complex
107932188
Cul4 complex
107932188
Cul7 complex
107932188
Cul8 complex
107932188
Cul9 complex
107932188
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107932188
TCR (transcription coupled repair) factors
Cul4-CSA complex
107932188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
107932188
NCBI-ProteinID:
XP_016719629
UniProt:
A0A1U8M245
LinkDB
All DBs
Position
D07:1688881..1691145
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVPMVPVGESSNSSAASSSTKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctactctagactccgatgtccccatggtacccgtcggcgagtcttccaacagctcc
gccgcttcctcttccactaagaaacccaagcgtttcgagatcaaaaagtggagcgccgtt
gccctttgggcttgggatattgttgtggataattgtgcaatttgtaggaatcacatcatg
gatctctgtatcgaatgccaagcaaaccaagccagcgccaccagtgaggaatgcactgtt
gcttggggggtctgcaaccatgcatttcactttcactgtatcagccgatggttgaagact
cgtcaagtgtgtccattggataatagtgagtgggagttccaaaagtatggtcactaa
DBGET
integrated database retrieval system