Gossypium hirsutum (upland cotton): 107932799
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Entry
107932799 CDS
T04793
Name
(RefSeq) RING-box protein 1a
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03420
Nucleotide excision repair
ghi04120
Ubiquitin mediated proteolysis
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107932799
04120 Ubiquitin mediated proteolysis
107932799
09124 Replication and repair
03420 Nucleotide excision repair
107932799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107932799
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107932799
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
107932799
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
107932799
Multi subunit type E3
SCF complex
Ring finger protein
107932799
Cul2 complex
107932799
Cul3 complex
107932799
Cul4 complex
107932799
Cul7 complex
107932799
Cul8 complex
107932799
Cul9 complex
107932799
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
107932799
TCR (transcription coupled repair) factors
Cul4-CSA complex
107932799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
Motif
Other DBs
NCBI-GeneID:
107932799
NCBI-ProteinID:
XP_016720386
UniProt:
A0A1U8M0Q5
LinkDB
All DBs
Position
D08:68771653..68773960
Genome browser
AA seq
118 aa
AA seq
DB search
MATLDSDVPMVPAGEASGSSAASSSTKKPKRFEIKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctactctagattccgatgtgccgatggtgcccgccggtgaagcttccggtagctcc
gccgcgtcttcctctactaagaagcccaagcgcttcgagatcaagaagtggagtgccgtt
gccctctgggcctgggatattgtggtggataattgtgcaatttgcaggaatcacattatg
gatctctgtatcgagtgccaagctaaccaagccagcgccaccagtgaggaatgcactgtt
gcttggggggtctgcaaccatgcatttcacttccattgtatcagccgatggctcaagact
cgtcaagtttgcccattggataacagtgagtgggagttccaaaagtatgggcactag
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