KEGG   Gossypium hirsutum (upland cotton): 107934720
Entry
107934720         CDS       T04793                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107934720
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    107934720
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD SWI2_SNF2 HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 107934720
NCBI-ProteinID: XP_016722701
UniProt: A0A1U8M7B7
LinkDB
Position
A12:87763867..87769785
AA seq 885 aa
MSLLRSFKETLKPCCNSSSFSQPSLSQQPPLPSVINQRKPPKSSLSRQLQRLEHDYLPST
QESHFENPKLSLPQLKNNAHMHGEQDDDDHQEEAEEEEVKEFGRAELSRVQFEDTGPYEP
LVLSSDGEFPIIQVPAYINCRLLAYQREGVKFLYMLYRSNHGGILGDDMGLGKTIQTIAF
LAAVYGKDEEYGDSRLLKENQIGQKGPVLIICPTSVICNWKCEFSRWAPFNVSLYHGSSR
ELILEKLQANGVEVLVTSFDTFRIHGNLLSGIKWEIVVVDEAHRLKNEKSKLYSACLEIK
THRRIGLTGTIMQNKIMELFNLFDWAAPGSLGAREHFREFYDEPLKHGQRATAPERFIRV
AGERKQNLVAVLHKYMLRRTKEATIGQLMLGKEDNVVFCAMSELQKRVYQRMLQLPDVQC
LINKDLPCSCGSPLAQVECCKRIVPKGIIWPYLHRGSPEGCDSCPFCLVLPCLVRLQQIS
NHLELIKPNPRDEPDKQRKDAEFASAVFGPDIDMVGGNAPSKSFMDLSDTRYCGKMRALE
KLMSSWALMGDKIFLFSYSVRMLDILEKFLIRKGFCFSRLDGSTPTNMRQSLVDEFNSSP
SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQRRHVVVFRLLAA
GSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGIQDCKEFQGELFGICNLFRDLSDKLFT
SEILELHEKQGQQHTEHDGDKQELTSLGSLPTPTEGSETFSSVSKNLHPGDIEIAATDKP
VLEDLGILYAHRNEDIVNSSAGIQQKIIVLTGDNKPRIDTNASWKRKTDWEENDVSTRDG
KKIQYGRLAQFKGMGVVEFSKWVLSATPSNRESLLRNYKRRKKEA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtcactactccgctcttttaaagaaacactaaaaccctgttgcaattcatcttcattt
tcacagccttccttatcccaacagccacctctaccatctgtaataaaccagaggaaaccc
cccaaatcttcgctttcgcgccagcttcaacgccttgaacacgactatctcccttctaca
caggaatcccatttcgaaaaccctaaattgtccttgccccaactcaaaaacaatgctcat
atgcatggagaacaagacgacgatgaccaccaagaagaggctgaggaggaagaagtaaaa
gaatttgggagagccgaattgagtcgggttcagtttgaggatacgggtccttacgagccg
ttggtattgtcttccgatggagaatttccaattatacaggtgcctgcatatattaactgt
cggttgcttgcctatcaaagagagggagtcaagtttttatacatgttatacaggagcaac
catgggggcattcttggtgatgatatgggacttggcaagacaatccagacaatcgcattt
ctcgctgctgtatatggaaaagacgaggaatatggtgactccagattactgaaggaaaac
cagattggacagaaaggacctgtattaataatctgtcccacttctgtcatctgcaattgg
aagtgtgaattctccagatgggcaccctttaatgtctctctttaccatgggtcaagccgt
gaactcattcttgagaagctacaagctaatggagttgaagttctggttaccagttttgac
acattcagaattcatggaaatcttttgtcagggatcaagtgggagattgtggtcgttgat
gaagcccaccgcctgaaaaatgaaaaatcaaaactctattcagcatgtctagaaattaag
actcacagacggattggtcttacaggaaccatcatgcagaacaaaattatggaactcttt
aatctctttgactgggctgctcctggatccttgggagcaagggaacattttcgggagttt
tatgatgaacccctcaaacatggccagagggcaactgctcctgaaagatttattcgggtt
gctggtgagcgtaaacagaacctggtagcagtccttcataaatatatgttaagaaggacg
aaagaggcgactattggacaacttatgttgggaaaggaagataatgttgtcttttgcgcc
atgagtgaattgcaaaaacgggtatatcagagaatgttgcagctgccagacgttcaatgt
cttattaacaaggacctgccttgtagctgtggaagccctcttgcccaagtagaatgttgc
aagaggattgtgcctaaaggaattatatggccttaccttcacaggggcagcccagagggt
tgtgattcatgccctttctgccttgtccttccttgccttgtcaggctgcaacagattagc
aatcacttggagcttattaagcctaatcctagggatgaaccagataaacaaagaaaagat
gcagaatttgcctctgctgtctttggtccagatattgatatggtgggagggaatgcccca
agtaaaagctttatggatttaagtgacactagatattgtggaaagatgagggccttggaa
aagttaatgtcctcatgggcgttgatgggtgacaaaatctttctttttagctactctgtc
aggatgcttgatatattggagaagtttcttatacggaaaggcttttgcttttcaagactt
gatggatctactcctactaacatgcgccaatctcttgttgatgagtttaactcaagtcca
agcaaacaagtgttccttatatcaacccgagctggtggacttggattgaatcttgtaagt
gctaatcgtgttgttatatttgatccaaattggaaccctgcccaagatttacaggcccag
gacagatcatttcgttttgggcagaggcgacatgttgtggttttccgccttcttgctgct
ggttcccttgaagaacttgtatattcacgtcaggtgtataaacagcagctgtcgaacatt
gctgtatctgggaaaatggaaaaaagatactttgaaggcattcaggactgcaaggaattt
caaggcgagctttttggaatctgcaatctgtttcgcgatctttcagataagcttttcaca
agtgaaattcttgaattacatgaaaagcaagggcaacagcacacagaacacgatggtgat
aagcaggagctaaccagtctaggctcccttccaactccgacagaaggaagtgaaacattt
tcttcagtgtccaagaatttgcatcctggtgacatagagattgctgctactgataaacca
gttcttgaggacttaggtatcttgtatgcccatcgtaatgaagatattgtcaacagtagt
gctgggatacaacagaaaataatagtccttactggcgataataagccgagaatagacaca
aatgcttcatggaagaggaaaacagattgggaggaaaatgacgtctcaaccagagatggt
aaaaagattcagtatggtcggctggcgcagttcaagggcatgggagtggttgagtttagt
aagtgggtactctctgcaactccttcaaatagggagagtttgcttcggaactacaaaaga
agaaaaaaggaggcgtga

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