Gossypium hirsutum (upland cotton): 107939027
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Entry
107939027 CDS
T04793
Name
(RefSeq) transcription factor PIF4
KO
K16189
phytochrome-interacting factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107939027
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107939027
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107939027
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
107939027
NCBI-ProteinID:
XP_016727800
UniProt:
A0A1U8MLU5
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Position
D09:complement(1962415..1966168)
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AA seq
390 aa
AA seq
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MNHCSSDWNFESDLPISNQKKLLGQDNELVELLWQNGKVVLQSQTHKKQDDETVSWIQHP
FEESFEKEMFSNFFSEFPVYDPMDHQHEQQEDDKSLKHKNNLMQREVNELSGMAIGSSHC
GSNQVRNDGDLSRGSSNGIGTTSTGLSVGTSKDDEDDDNGGQVENEKGTSGGVTSSQKRK
NRDGREDYECQCEFAEVKPVRRSGSCRRQSRAAEVHNLSERRRRDRINEKMRALQELIPH
CNKTDKASMLDEAIEYLKSLQLQLQVMWMGNGMAPMMFPGIQHYMSPMAMGTAPPTMPSI
QNQRFIQNPTFSEQYARFLGFHHMQTASQPINMFGYGSQTTPQSPTVLGFSNGSNPLNGG
TTATNNTSLSGKIGGEVQLECKTTANPGFN
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaaccactgtagttcagattggaattttgaatctgatcttccaatctccaatcaaaaa
aaactcttgggtcaagataatgaactagtagagcttttatggcagaatgggaaggtagtt
ttgcaaagccaaactcataagaaacaagatgatgaaacagtctcttggatccaacaccct
tttgaggaatcatttgagaaagagatgttttccaactttttctctgaatttccagtttat
gaccccatggatcaccaacatgaacaacaagaggatgataaaagtttgaaacataagaac
aatttgatgcaaagagaagttaatgaactttcaggaatggcaattgggtcaagccattgt
ggaagcaatcaagttagaaatgatggagatcttagcagaggatcaagcaatggaattgga
actacatccactggtttatctgtagggacatctaaagatgatgaagatgatgataatggt
ggccaagttgaaaatgagaaaggaacttcaggtggagtcactagtagccagaaaaggaag
aacagagatggtagggaagattatgagtgtcaatgtgagtttgctgaagttaagccagtc
cgacgatctgggtcttgtcgtcgccagagtcgagctgccgaagttcataatttatcggag
aggagaagaagggataggatcaatgagaagatgagagcattacaagaactcatccctcac
tgcaataagacagataaagcatctatgctagatgaggccattgaatatttgaagtcactt
caattacaacttcaggtcatgtggatgggaaatgggatggccccaatgatgttccctgga
atccaacattatatgtcccccatggcaatgggaacagctccacctacaatgccttcaatt
caaaaccaacgttttattcaaaatcctactttttctgaacaatatgcacgttttttaggc
tttcatcatatgcaaacagcttctcagccaattaatatgtttggttatggctcccaaact
acacctcaaagtcccacggtattaggctttagcaatggcagtaacccactcaatggagga
acaactgctaccaataatacttctctaagtggcaagataggtggagaggttcaacttgag
tgcaagaccactgccaatccgggatttaactga
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