Gossypium hirsutum (upland cotton): 107942427
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Entry
107942427 CDS
T04793
Name
(RefSeq) 4-coumarate--CoA ligase-like 6 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00130
Ubiquinone and other terpenoid-quinone biosynthesis
ghi00940
Phenylpropanoid biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
ghi_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
107942427
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
107942427
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
107942427
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Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107942427
NCBI-ProteinID:
XP_016731582
UniProt:
A0A1U8MXM2
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Position
D08:55522833..55526155
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AA seq
559 aa
AA seq
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MATSLNFFPQTSEPKTTHLPDWYSPETRIYSSTYSSISLPTDPFLDIVSFIFSHQHDGVT
ALIDSSSGYSISYSKLLPLVQSMASGLHHLGVSQGDVVLLLLPNSVNFPIIFFSVLYLGA
VVTTMNPLSNMMEVKKQIVDCGVRFAFTLLENVDKLQNLGVHAIGVPENMDLDSEKTGFL
SFRKLIGGQFGKAPRPVIRQQDTAAIMYSSGTTGVSKGVVLTHGNFIATTELFVRFEASQ
YEYSSSKNVYLAVLPMFHIYGLSLFVVGLLSLGSSIVIMRRFDASELVKVIDDYGVTHFP
VVPPILTTLTMRAKHVCENSLQSLKQVSCGAAPLSGKTIEDFVQALPHVDFIQGYGMTES
TAVGTRGFNNEKHHNYSSIGLLAPNMQAKVVDWNSGSSLPPGFHGELWLRGPAIMQRYIN
NVEATNMTIDKDGWLRTGDIVCFDGDGYLYLSDRLKEIIKYKGYQIAPADLEAVLISHPE
ILDAAVTSAADEVCGEIPVAFVVRRHGSTLTKGAVIDFVANQVAPYKKVRRVVFTESIPK
SAAGKNLRKELKSFISSRL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaagcttgaacttcttcccccagacctcagaacccaaaactactcatcttcct
gactggtattcaccagaaacaagaatctattccagcacgtattcctctatatctctccca
actgatccatttcttgacattgtttccttcattttctctcaccaacatgatggggttact
gctttgattgattcctcatctgggtattcaatatcttactcaaagctattacctttggtc
caatcaatggcctcaggtctccaccacctcggtgtttcccaaggggatgtggtcttgctt
ttgttgccaaattctgttaatttccccattattttcttcagcgttttatatttgggtgca
gttgttaccaccatgaatccactaagtaatatgatggaggtcaagaaacaaattgttgat
tgtggtgtgcgttttgcatttactctgctcgaaaatgttgacaaacttcagaacttgggt
gttcatgcaattggggtaccagaaaacatggacctggattcagaaaagactggtttttta
tcttttcgtaagcttattgggggccaatttggtaaggcgccaaggcctgtgattaggcag
caggacacggcggcaataatgtattcatcaggtactacaggcgttagcaagggggttgta
ttaacacatgggaattttatagcaacgactgagctttttgtaagatttgaagcttcacag
tacgaatattcaagttcaaagaatgtgtatttagctgttcttccaatgttccatatatat
ggattatcacttttcgtggttggattattgtcattgggttctagcattgttatcatgagg
agatttgatgccagtgaactggtgaaagtaattgatgactatggagttactcactttcca
gttgttccacctatactgacaacattgacaatgagagccaagcatgtttgtgaaaatagc
ttgcagagtttaaaacaggtttcctgtggtgctgctcctttgagcgggaaaaccatagag
gactttgttcaggctcttcctcatgttgatttcattcagggctatggcatgactgaatca
actgcagtaggaactcgtggcttcaacaatgaaaaacatcataattattcttcaatagga
cttctagcaccaaacatgcaagctaaagtggtagattggaattctggttcttctttgcct
cctggctttcatggcgagctttggctaagaggacctgcaattatgcaacgatacataaat
aatgttgaggccaccaatatgacaattgataaagatggctggctacgtactggtgacatt
gtttgttttgatggagacgggtatttgtatttatctgaccgcttgaaagagattataaag
tacaagggctatcagatcgcccctgctgatttagaggctgtattgatttcccatcccgag
atactagatgctgctgtaacttcagccgctgatgaagtatgcggtgagattcctgtggca
tttgtggtgaggaggcacggtagcacactgaccaaaggagctgtcatagacttcgtggct
aatcaggttgcaccttataagaaagtaagaagggtggtgtttacagaatcaattccaaag
tctgctgcaggaaaaaatcttcgaaaagaacttaagagtttcataagttctagactttaa
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