Gossypium hirsutum (upland cotton): 107945543
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Entry
107945543 CDS
T04793
Name
(RefSeq) transcription factor UNE10 isoform X1
KO
K16189
phytochrome-interacting factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107945543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107945543
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107945543
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
POX
Motif
Other DBs
NCBI-GeneID:
107945543
NCBI-ProteinID:
XP_016735086
UniProt:
A0A1U8N7K6
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All DBs
Position
D12:complement(37859665..37863200)
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AA seq
446 aa
AA seq
DB search
MSQCVPSWELDDNNPLTTRHHSFRFNSNSTAPDVPMLDYEVAELTWENGQLAMHSLGPPR
VVAKQLNATTWDKPRASGGGGGTLESIVNQATCFPYGSKDSVGVGGDELVWLDHHRVSAA
ASSSSATMAMDALVPCSEDKTTTAHVLESMPGLGGGGTCMMGCSTRVGSCSGTVNTQDDV
TRKREKAVGAQVAPPEWEQSASASATFGRDSHRNVTVDTYDKDFGVGFTSISHGSIENTK
TATDNDHDSASHSKPQEETGEEDKKETMKSSISTKRSRAAAIHNQSERKRRDKINQRMKT
LQKLVPNSSKTDKASMLDEVIEYLKQLQAQVQMMNRMNLPSMMLQQQLQMSMMAPMGMGM
SVMDMNFMGRPNIIGISPVLSNPFMTMNTPWDGSNNNDRLQQAASMTDPLSTFLACQSQP
MTMDAYSRMAAMYQQMQQPPASSSKS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgtgttccgagttgggaactggatgacaacaatccactcaccactcgccat
cactcgttccgcttcaactcaaattccactgcccctgatgttcccatgttagattatgaa
gtagctgaattaacatgggaaaatgggcaactagccatgcacagcttaggtccaccgcgt
gtggtggctaaacaactaaacgccaccacttgggataaaccaagagccagtggcggtggc
ggtggcactttagagtctatagtgaaccaggctacttgttttccatatggtagtaaggat
tctgtcggtgttggtggggatgaattggtatggttggaccaccaccgtgtttcggcggcg
gcgtcgtcttcatcagccaccatggctatggatgctttagttccttgttcagaagacaag
accaccaccgcacacgtgttggaatctatgccgggtcttggtggtggtggaacttgtatg
atgggatgttccactagggtaggatcctgtagtgggacggttaatacacaagacgatgtc
acaaggaaacgcgaaaaggcggtgggtgcacaagtagcaccaccggaatgggaacaaagc
gcaagtgccagtgccacgttcggaagagacagtcaccggaacgtgaccgtcgatacgtac
gacaaagattttggtgttggattcacttctatttcacatggttccattgaaaacacgaag
actgcaacagataatgatcatgattcagcctctcacagtaaacctcaggaggagacaggt
gaggaagacaaaaaggaaactatgaaatcttccatttcaacaaaaaggagcagagctgca
gctatccataaccaatctgaacgtaaaagaagagataagataaatcaaaggatgaaaaca
ttacagaaattggtacctaattcaagcaagacagacaaagcttcaatgttagatgaagtg
attgaatacttaaaacaattacaagcacaagtccaaatgatgaataggatgaacttacca
tcgatgatgttgcaacaacaacttcaaatgtcgatgatggcaccgatgggaatgggtatg
agtgttatggacatgaacttcatgggccgaccaaacatcattggtatctcacctgttttg
tctaatcctttcatgacaatgaatacaccttgggatggttctaacaacaatgatcggtta
caacaagctgcttcaatgacagaccctttatctacattccttgcttgtcaatcacaaccg
atgactatggatgcttatagtagaatggccgctatgtatcaacaaatgcaacaaccgcca
gcttctagttcaaagagttaa
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