KEGG   Gossypium hirsutum (upland cotton): 107946170
Entry
107946170         CDS       T04793                                 
Name
(RefSeq) switch 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107946170
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    107946170
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 SWI2_SNF2 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 107946170
NCBI-ProteinID: XP_016735879
UniProt: A0A1U8NDI6
LinkDB
Position
D12:46115524..46121257
AA seq 885 aa
MSLLRSFKETLKPCCNSSSFSQPSLSQQPPLPSVINQRKPPKSSLSRQLQRLEHDYLPST
HESHFGNPKFSLPQLKKNAHMHGQQDDDDHQEEAEEEEVKEFGRAELSRVQFEDTGPYEP
LVLSSDGEFPIIQVPAYINCRLLAHQREGVKFLYMLYKSNHGGILGDDMGLGKTIQTIAF
LAAVYGKDEEYGDSRVLKENQIGQKGPVLIICPTSVICNWKCEFSRWAPFNVSLYHGSSC
ELILEKLQANGVEVLVTSFDTFRIHGNLLSEIKWEIVVVDEAHRLKNEKSKFYSACLEIK
TRRRIGLTGTIMQNKIMELFNLFDWAAPGSLGTREHFREFYDEPLKHGQRATAPERFVRV
AGERKQHLVAVLHKYMLRRTKEETIGQLMLGKEDNVVFCAMSELQKRVYQRMLQLPDVQC
LINKDLPCSCGSPLAQVECCKRIVPKGIIWPYLHRGSPEGCDSCPFCLVLPCLVKLQQIS
NHLELIKPNPRDEPDKQRKDAEFASAVFGSDIDIVGGNAPSKSFMDLSDTRYCGKMRALE
KLMSSWALMGDKILLFSYSVRMLDILEKFLIRKGFCFSRLDGSTPTNMRQSLVDEFNSSP
SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQRRHVVVFRLLAA
GSLEELVYSRQVYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGICNLFRDLSDKLFT
SEILELHEKQGQQHTEHHSDKQELTSLGSLPTPAEGSETFSSVSKNLHPSDIEIAATDKP
VLEDLGILYAHRNEDIVNSRPGIQQKIIVLTGDNNPRIDTNASWKRKTDGEENVVSTRDR
KKIQYGRLAQFKGMGVVEFSKWVLSATPSDRESLLRNYKRRKKEA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtcactactccgctcttttaaagaaacactaaaaccctgttgcaattcatcctcattt
tcacaaccttccttatcccaacaaccacctctaccatctgtaataaaccagaggaaaccc
cccaaatcttcgctttcgcgccagcttcaacgccttgaacacgactatctcccttctaca
catgagtcccatttcggaaaccctaaattctccttgccccaactcaaaaaaaatgctcat
atgcatggacaacaggacgacgatgaccaccaagaagaggctgaggaggaagaagtaaaa
gaatttgggagagccgaattgagtcgggttcagtttgaggatacgggtccttacgagccg
ttggtattgtcttccgatggagaatttccaattatacaggtgcctgcatatattaactgt
cggttgcttgcccatcaaagagagggagtcaagtttttatacatgttatacaagagcaac
catgggggcattcttggtgatgatatgggacttggcaagacaatccagacaatcgcattt
ctcgctgctgtatatggaaaagacgaggaatatggtgactccagagtactgaaggaaaac
cagattggacagaaaggacctgtattaataatctgtcccacttctgtcatctgcaattgg
aagtgtgaattctccagatgggcaccctttaatgtctctctttaccatgggtcaagctgt
gaactcattcttgagaagctacaagctaatggagttgaagttctggttaccagttttgac
acattcagaattcatggaaatcttttgtcagagatcaagtgggagattgtggtcgttgat
gaagcccaccgcctgaaaaatgaaaaatcaaaattctattcagcatgtttagaaattaag
actcgcagacgtattggtcttacaggaaccatcatgcagaacaaaattatggaactcttt
aatctctttgactgggctgctcctggatccttgggaacaagggaacattttcgggagttt
tatgatgaacccctcaaacatggccagagggcaactgctcctgaaagatttgttcgggtt
gctggtgagcgtaaacagcacctggttgcagtccttcataaatatatgttaagaaggacg
aaagaggagactattggacaacttatgttgggaaaggaagataatgttgtcttttgcgcc
atgagtgaattgcaaaaacgggtatatcagagaatgttgcagctgccagacgttcaatgt
cttattaacaaggacctgccttgtagctgtggaagccctcttgctcaagtagaatgttgc
aagaggattgtgcctaaaggaattatatggccttaccttcacaggggcagcccagagggt
tgtgattcatgccctttctgccttgtccttccttgccttgtcaagctgcaacagattagc
aatcacttggagcttattaagcctaatcctagggatgaaccagataaacaaagaaaagat
gcagaatttgcctctgctgtctttggttcagatattgatatagtgggagggaatgcccca
agtaaaagctttatggatttaagtgacactagatattgtggaaagatgagggccttggaa
aagttaatgtcctcatgggcgttgatgggtgacaaaatccttctttttagctactctgtc
aggatgcttgatatattggagaagtttcttatacggaaaggcttttgcttttcgagactt
gatggatctactcctactaatatgcgccaatctcttgttgacgagtttaactcaagtcca
agcaaacaagtgttccttatatcaactcgagctggtggacttggattgaatcttgtaagt
gctaatcgtgttgttatatttgatccaaattggaaccctgcccaagatttacaggcccag
gacagatcatttcgttttggacagaggcggcatgttgtggttttccgccttcttgcagct
ggttcccttgaagaacttgtatattcacgtcaggtgtataaacagcagctgtcgaacatt
gctgtatctgggaaaatggaaaaaagatactttgaaggcgttcaggactgcaaggaattt
caaggcgagctttttggaatctgcaatctgtttcgcgatctttcagataagcttttcaca
agtgaaattcttgaattacatgaaaagcaagggcaacagcacacagaacaccatagtgat
aagcaggagctaaccagtctaggctcccttccaactccggcagaaggaagtgaaacattt
tcttcagtgtccaagaatttgcatcctagtgatatagagattgctgctactgataaacca
gttcttgaggacttaggtatcttgtatgcccatcgtaatgaagatattgtcaacagtaga
cctgggatacaacagaaaataatagtccttactggcgataataacccgagaatagacaca
aatgcttcatggaagaggaaaacagatggggaggaaaatgttgtctcaaccagagacagg
aaaaagattcagtatggtcggctggcgcagttcaagggcatgggagtggttgagtttagt
aagtgggtactctctgcaactccttcagatagggagagtttgcttcggaactacaaaaga
agaaaaaaggaggcatga

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