Gossypium hirsutum (upland cotton): 107948601
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Entry
107948601 CDS
T04793
Name
(RefSeq) E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107948601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107948601
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107948601
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107948601
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
107948601
NCBI-ProteinID:
XP_016738703
UniProt:
A0A1U8NKY6
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All DBs
Position
A04:65026451..65029158
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AA seq
283 aa
AA seq
DB search
MEVDLEPKVLDTSSMTEKGYGEFGCSHYRRRCKIRAPCCDEIFDCRHCHNDAKNSIEIDP
FDRHEVPRHDIKRVICSLCDREQDVQQYCINCAVCMGKYFCSKCNFFDDDVSKKQYHCDE
CCICRIGGAENFFHCDKCGCCYSMIMKNSHKCVEKAMHHNCAVCFEFLFDTTKEITVLPC
GHTIHLECVREMERHSQYSCPVCSKSFCDMTRVWERLDREVASTGMPQIYQNRRVWILCN
DCGENSEVNFHFVAHKCPICSSYNTKLTRGRIATGSSEIMKTV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatcttgaacccaaggtgttagacacttcatctatgacggagaagggatac
ggagaatttgggtgttcacactatagaagaagatgcaagatcagggcaccttgttgtgat
gagatatttgattgcagacactgccataacgatgccaagaactcaattgaaattgatcct
tttgatcgtcatgaggttcctcgccatgatataaaaagggttatttgttccttgtgtgac
agagaacaagatgttcaacagtattgcattaactgtgcggtctgcatgggaaagtatttc
tgttcaaaatgcaactttttcgatgatgatgtctcgaaaaaacagtaccattgtgatgaa
tgctgcatctgcagaattggtggagcagagaactttttccattgtgataaatgcggatgt
tgctattctatgataatgaagaactcccacaagtgtgttgaaaaagccatgcaccataat
tgcgccgtttgttttgagtttctctttgatacgacaaaagagataactgtcttaccatgt
ggacacacaatacatttggaatgtgtacgagagatggaacgacattcccagtattcatgt
cctgtttgctcaaaatcgttttgtgatatgacccgagtgtgggaacgacttgaccgagaa
gttgcttcaacagggatgcctcaaatttaccagaataggagggtttggattctctgcaat
gactgtggggaaaattccgaggttaatttccattttgtggcacacaagtgcccgatatgc
agctcatacaataccaagctgacacgtggacgcattgctacgggctcatcagagattatg
aaaacagtttga
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