Gossypium hirsutum (upland cotton): 107948957
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Entry
107948957 CDS
T04793
Name
(RefSeq) protein SIEL-like
KO
K13141
integrator complex subunit 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107948957
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
107948957
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
Cnd1
HEAT_2
RTP1_C1
PDS5
Adaptin_N
INTS4_8HBD
Motif
Other DBs
NCBI-GeneID:
107948957
NCBI-ProteinID:
XP_016739126
UniProt:
A0A1U8NJE1
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Position
A04:78803543..78810661
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AA seq
966 aa
AA seq
DB search
MGRVAELERRQSAMELHVINSIQQSLDNNQPLSFQAVASLRSLIINPATPDSTLSSVLDA
LTRSLQLNRDPVFLHHAVKLLSDLASHRPHLSPFALDLLRSDSLFSSASPRLVGESLSVL
LSLASIGNDMDAARFVSLCLGPSVSVRQCLLRNAEKLVFRESVLLAVFLGFTRDPYPYVR
KEALDGLVKLCKNGDFDDRDVIEGCYCRAVELLRDAENYVRSAAVRAVCEWGRLLVICSE
DMNKQDSSDAVFIQLGCMVRDMSLDVRLEAFEALGKIGLVSEDILLQTLSKKVLGINKDK
AYKPIEGLDISVSAVAGAYIHGLEDEFSEVRMSACYSLRTLTVFSLRFACEALNLMMDML
NDDSTVIRLQALDTIHHMATSDHLKVEKIHIHRFLSVLVDSSSVIRSMTRKILKLAKLPQ
FELFKLCIDGLLGNLEIYPQDEADVLSALFHFGRNHGKFTVHIIEEVAPEMEPASGGKLS
FDSTRVAAFLVLAISAPLSHEKDVSAIPPRIFSYAVTWLGRISYGLSDIMNQEKLLAYLS
ECSRSSTISLADFKINEALLTVEGDASIPLCSKVDSPVSMPFWKDSGGISDYHHQEFLSL
GKSAAHAEYELGEHSELRKYVNLIFKKVKDSWSLVELGCTTEACKGIRACKEEVASFTTE
SPGSFGAVAFTLQYLQVIEMLAKVWGHLRATKMLNPNGVGKLELLFAKLDRRLREISNRF
IGLSKGEELQILDLVLVACLLRLSKVEICCCNAAMKLLSSTVAHVEYLHKEGSIEPSNFV
TEVKKSLHDADSSSSSSSCQPLLFKKLLDSFSLQQFVLYGTPRSVHAELAVPGNDSENPL
PFIPGIPASIPLAITLHNVLTESRLWVRISMGEESTQFVFLDLNLIRNKKRSINVVREFT
FVAPFYRTPKAVSFTVRASLGLECFRENVDRVKVFGGPKCELTYLCPEKEIFLCKSTECK
SKSAFT
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggttgcagagcttgagcgcaggcagtcggcaatggagctgcacgttataaat
tcaatccaacaatccctcgacaataaccaacccctctctttccaagctgtagcttccctc
agatccctcattatcaaccctgccacccccgattccacactctcctcagtcctcgacgcc
ctaactcgctctctccaactcaatcgcgaccccgtcttcctacatcacgctgttaagctc
ctcagcgacctcgcctctcaccgcccccacctatcccctttcgcactcgacttgctccgt
tccgactcactcttctcctccgcttcgcctcgtcttgttggtgagtcactctctgtactt
ctttctctcgcttccatcggaaacgacatggacgccgctcgtttcgtctctctctgcctt
ggcccttcggtttctgtgcgacaatgcttattgagaaatgctgagaagcttgtctttagg
gaatcggtgttgttagccgtttttttagggtttacaagggatccgtatccttatgtgagg
aaagaagctttggatggattggtgaaactgtgtaagaatggtgattttgatgatcgtgat
gttatcgagggatgctactgccgtgctgttgagctgctccgtgacgcagagaactatgtt
agatctgcagcagttcgcgccgtatgtgaatggggtagattacttgttatatgcagtgaa
gacatgaacaagcaagactcatcagatgcagtgtttatccagcttggctgtatggtaaga
gatatgagtttagatgtaaggcttgaagcctttgaagctctagggaagataggacttgta
tctgaagatatcttactacaaaccttgtctaagaaagtcctaggaatcaacaaagataaa
gcttacaaaccaatagaagggcttgacatttcagtttctgctgttgctggagcttatata
catggacttgaggatgagttctctgaggtacggatgtctgcctgttactctttgcgtacg
ctcactgtcttctctttgcgatttgcttgtgaagccttaaacctgatgatggacatgctg
aatgatgattcaacggttatcaggctgcaagctcttgatacaatacatcacatggcaacc
agcgatcatctaaaagttgaaaaaatacacattcacaggtttctgagcgtacttgttgac
agcagttctgtcataagatccatgacaaggaaaatactcaaattagccaagttgccacaa
ttcgagttgtttaaattgtgtattgatggccttcttggaaatttggagatatatccacag
gatgaagctgatgtgctttctgctctgtttcattttgggagaaatcatgggaagttcaca
gttcacattattgaggaagttgctccagagatggagccagcttctggaggcaaattgagc
tttgatagtacaagggtagcagcatttcttgtgctagccatctcagctccactgtcacat
gaaaaggatgttagtgctattccacctagaatattttcttatgcagttacatggcttggg
agaatctcttatggtttaagtgatattatgaaccaagaaaagcttttggcttatttatcc
gagtgcagtagatcctcaacaatttctcttgctgacttcaaaataaatgaggcattgctg
acagtagaaggtgatgcctcaattcctctctgttctaaggttgatagtcctgtcagcatg
cccttctggaaagatagtggagggatctctgattatcatcatcaggaatttttgagttta
ggaaagtcagctgctcacgcagaatatgagttgggggagcattctgaattaagaaagtat
gtgaaccttatctttaaaaaggtcaaggactcttggtcattggttgagttaggctgcact
actgaagcatgcaagggtataagggcctgtaaagaagaagtagcatcatttaccacggag
tccccaggatctttcggtgctgtagcatttactctgcagtatctccaagttatagaaatg
cttgctaaagtttgggggcaccttagggcaacaaaaatgcttaatcctaatggagtggga
aaattagagcttctatttgcaaaattggacaggaggctaagggaaatcagtaataggttc
attggtttgtccaaaggagaggagttgcaaatattggacctggtacttgtggcttgtctt
ttgagattgtccaaagtggagatttgctgttgcaatgccgcaatgaaattattgtcgtct
acagttgcccatgtagaatatctccacaaggagggatctattgaaccgtctaattttgta
actgaagttaagaaatcattgcatgatgctgactcttcaagcagcagtagtagctgccag
ccacttctcttcaagaagttacttgactccttttcccttcagcagtttgtgttatatgga
actcccaggagcgtacatgcagaactggcagtccccggtaatgattctgaaaaccctctt
ccttttattccgggaatccctgcttctataccacttgcaatcactttgcacaacgttttg
actgaaagtaggttgtgggtgaggataagtatgggtgaggaatcaactcagtttgtattt
ttagatttgaacctaatcagaaataaaaagagaagcattaatgtggtgagggaattcaca
tttgtggctcccttctaccgaaccccaaaagctgtttcatttacggtgagggcttcttta
ggtttagaatgctttagggagaatgttgatcgagtcaaagtctttgggggtccaaaatgt
gaactaacatatctttgcccagagaaagagatttttctatgtaagagcactgaatgtaaa
agtaaatctgcttttacttaa
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