Gossypium hirsutum (upland cotton): 107958112
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Entry
107958112 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: phosphatidate phosphatase PAH2-like
KO
K15728
phosphatidate phosphatase LPIN [EC:
3.1.3.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00561
Glycerolipid metabolism
ghi00564
Glycerophospholipid metabolism
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
Module
ghi_M00089
Triacylglycerol biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00561 Glycerolipid metabolism
107958112
00564 Glycerophospholipid metabolism
107958112
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107958112
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.4 phosphatidate phosphatase
107958112
Protein phosphatases and associated proteins [BR:
ghi01009
]
HAD phosphatases
Other HAD phosphatases
107958112
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2
Lipin_N
APP1_cat
Motif
Other DBs
NCBI-GeneID:
107958112
NCBI-ProteinID:
XP_040969812
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All DBs
Position
A05:20300950..20308256
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AA seq
1016 aa
AA seq
DB search
MHAVGRLGSYISRGVFTFSGPFHPFGGAVDIIVVEQPDGSFKSSPWYVKFGKFQGVLKSR
VRTVSIAVNGVEANFRMFLDHTGEAYFLREIDVEESKSDGVSFPFSSGDELLSGNRKPMK
SESCSYDNDNSNSVAQVDLDNGKLVGRTSSRRSRIFGRVFGERSTKEDSYQDGAGGTGVM
RSESLERAEFAAELLEVKWSTNLTSIRSNNNALRFSSLNDALADKGFKEEIQNDAENLSQ
AYVHDKEDKSIDRQTVLDKTDYCNEQNVSCSHTGLENLECSVEEANVQVSCVSTEQQMVE
TSLXVCFMEDKCKVIANVLGTIDDRSVRNFDHADNETVAVSGMSVPHLQSEYKFESCIDK
WFDEEVADNESNVVLPGCGISIKENVSDGPQAFLYCKTSESSVITLDCSSQQTHQTLCLS
DIENGKAHVHAEPLLRATELFPEVTVLKKNEDKELDSEGVLTMSVEMVGVDPVIGLEETK
SHSIHITSTISDLGDDVENARTIKDVLHPSLGSVDDSQNFYGDSDPKRSVPPSATSEDEQ
FLFSDLDEFKLHEPDCVNKDLHSSICTETEELNGLCNVNNEPCLNPHNFVQESPLTDLDF
SVEKAGIVSNRISISRNHKVAGEKNGWQIESLSTTWPIVAKFDVNNNLPLSHSLDSSCET
LKWISIKEDDERPLAHGKPSCKESETSRKLENTLYNPCIGDPSKAVVSRSGSWRLWPFSM
KRSISRKDVLSAPADNRGLDAKNAVDSAVASDDDKNVLKTKQVKKMIRAITPTSEQLASL
NLKDGINHITFTFSTSMLGKQQVDSRIYLWKWNTRIVISDVDGTITRSDVLGQFMPMVGI
DWLQTGVAHLFSAIKENGYELLFLSARAISQAYITRQFLVNLKQDGKGLPDGPIVISPDG
LFPSLYREVIRRAPHEFKIACLEDIKALFPLDCNPFYAGFGNRDTDEMSYLKVGIPKGKI
FTINPKGEVVTNHHVATKSYSSLHDLVHRVFPPMASEQEEFNSWNFWKLPPPLIYI
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcggtgggcaggctaggtagctatatctcccgcggtgtgtttactttttctggt
ccctttcatccttttggcggtgcagtggatataattgtagtagaacaacccgatgggagc
ttcaaatcatcgccttggtatgttaagttcggtaaatttcaaggggttttaaagtcaagg
gtaaggacggtaagcatcgctgttaatggcgttgaagcgaatttccgcatgtttcttgat
catacaggggaagcatattttctcagggagattgatgttgaagaaagtaaatctgatggt
gtatcatttcctttttcttccggggatgagctgttgtctggtaatagaaagccaatgaag
tccgagagttgcagctatgataatgataactcaaactcagtggctcaggttgatctggat
aatgggaagcttgtgggtcggactagttcccggcggtcacggatatttgggcgtgttttt
ggagaaaggtctacaaaggaggatagttaccaggacggtgctggtggtactggtgtaatg
agatcagagtcattggagcgtgccgagtttgctgctgagctgctggaggtgaagtggtct
accaatctcacctctatcagatcaaacaataatgctttacgattttcttctttaaatgac
gcattggccgataaaggtttcaaagaggagatacagaatgatgcagaaaacctgtctcag
gcttatgtacatgataaggaggacaagagtattgatcgccagaccgtactggacaaaact
gattactgcaacgagcaaaatgtcagctgttctcatactggccttgagaacctagaatgt
tctgttgaggaagctaatgtacaagtgtcttgtgtaagcactgagcagcaaatggttgaa
acctccttgtaggtgtgttttatggaagataaatgcaaagtaattgccaatgtattagga
actattgatgaccgtagtgtcaggaattttgatcatgctgacaacgagaccgttgctgtc
tcagggatgagtgttcctcatctgcaaagtgaatataagtttgaatcgtgtattgacaag
tggtttgatgaagaagtggctgataatgaaagcaatgttgttttaccaggctgtgggatt
tccattaaggagaatgtctcagatggtcctcaagcttttctttactgcaaaacatcagag
agctcagtaataacattggattgttccagtcagcaaactcatcaaacactgtgcctttct
gacatagaaaatggtaaagcacatgttcatgctgaaccactgcttagagcgactgagcta
tttccagaggttacagttctcaagaaaaatgaggacaaggagttagattctgaaggggta
ttaaccatgtcagttgaaatggtcggtgttgatcctgtaattggtttggaggaaacgaag
tctcatagcattcacattacttccaccatcagtgatttaggtgatgatgttgaaaatgct
agaactatcaaggatgttctccatccttctttggggtctgttgatgattctcagaacttt
tatggtgatagtgacccaaagagaagtgttccaccatcggcgacttcagaggatgagcaa
tttcttttcagtgaccttgatgaattcaaactccatgagccagattgtgtaaataaagat
cttcattcctcaatttgtactgaaactgaagaattaaatggtttatgtaatgtgaataat
gagccatgtttgaatcctcacaattttgttcaggagagtccattaactgatctggatttt
tctgttgaaaaggcagggatagtctctaatcgtattagtatttctagaaatcataaggta
gctggtgagaagaatgggtggcagattgaatcactttctactacgtggcctattgtggcc
aagtttgatgtaaacaacaatcttcctctaagccattctctggattctagttgtgaaacc
ctgaagtggatatcaatcaaggaagatgatgaacggccattagcacatggaaagccaagt
tgcaaggagagtgagacttcaaggaagctggaaaatactctttacaatccttgcattggg
gatccatcaaaagctgtagtctcccgtagtggaagctggaggctttggcctttttctatg
aaaagatcaatatctaggaaagatgtgctgtcagctccagctgataacagaggtttggat
gctaagaatgctgtagacagtgccgttgctagtgatgatgataaaaatgtgcttaaaacc
aagcaggtgaagaagatgatcagggcaatcactccgacctctgaacagctggcatcgttg
aatttaaaggatggcattaatcatataaccttcacattttccacctctatgctagggaag
cagcaggttgattcgagaatctatttgtggaaatggaacactcgtatagtaatctcagat
gttgatgggacaattacaagatcagatgttctaggtcagttcatgcctatggttgggata
gattggttacaaacaggtgttgcacatttattttcagctattaaggaaaatgggtacgag
ttgctttttctgagtgcacgggcgatatcccaggcgtatatcacgagacaatttttagtc
aacctcaaacaggatggtaagggtttaccagatggtccaattgttatttccccagatggg
ctttttccgtccctatatagagaagttatcagaagagctcctcatgaattcaagattgcg
tgcttagaggatatcaaagcattgtttcctttagattgcaatccattctatgctggcttt
gggaacagagacactgatgaaatgagctatcttaaggtcggaatcccaaaagggaaaatc
ttcactattaatccaaagggtgaggttgttacaaatcatcatgttgccacgaaatcttac
agttcccttcatgatcttgttcatcgcgtgtttccaccaatggcctctgagcaggaagaa
tttaactcatggaatttctggaaactgccgccacctctgatatatatatga
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