KEGG   Gossypium hirsutum (upland cotton): 107962625
Entry
107962625         CDS       T04793                                 
Name
(RefSeq) NHP2-like protein 1
  KO
K12845  U4/U6 small nuclear ribonucleoprotein SNU13
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03008  Ribosome biogenesis in eukaryotes
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107962625
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107962625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ghi03041]
    107962625
   03009 Ribosome biogenesis [BR:ghi03009]
    107962625
Spliceosome [BR:ghi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    107962625
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  Sno RNPs
   Box C/D snoRNPs
    107962625
SSDB
Motif
Pfam: Ribosomal_L7Ae PELOTA_1
Other DBs
NCBI-GeneID: 107962625
NCBI-ProteinID: XP_016754569
UniProt: A0A1U8J271
LinkDB
Position
A06:complement(10874201..10876284)
AA seq 128 aa
MTGEPVNPKAYPLADAQLTTTILDLVQQAANYKQLKKGANEATKTLNRGISEFIVMAADT
EPLEILLHLPLLAEDKNVPYVFVPSKQALGRACGVTRPVIACSVTSNEGSQLKSQIQQLK
DAIEKLLI
NT seq 387 nt   +upstreamnt  +downstreamnt
atgactggagaaccagtgaaccccaaagcatacccactagcggatgctcagttaacaacc
acgattttagatcttgttcaacaagctgccaactacaagcagctcaaaaagggagctaat
gaagctactaagaccctgaatagaggtatctcggagttcattgtgatggctgctgatacc
gagccccttgagattctgctccatcttcctttgcttgctgaagataagaatgttccctac
gtatttgttccttcaaagcaagcacttggacgtgcatgtggggttacaagacctgtaatt
gcatgttctgtcacatcaaacgaaggaagccaattgaaatcccaaatacaacaactcaag
gatgctattgagaagctcttgatctag

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