Gossypium hirsutum (upland cotton): 107962711
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Entry
107962711 CDS
T04793
Name
(RefSeq) probable glutamate carboxypeptidase LAMP1
KO
K01301
N-acetylated-alpha-linked acidic dipeptidase [EC:
3.4.17.21
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107962711
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.17 Metallocarboxypeptidases
3.4.17.21 glutamate carboxypeptidase II
107962711
Peptidases and inhibitors [BR:
ghi01002
]
Metallo peptidases
Family M28: aminopeptidase Y family
107962711
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Gene cluster
GFIT
Motif
Pfam:
TFR_dimer
Peptidase_M28
PA
Peptidase_M20
Nicastrin
EzrA
Motif
Other DBs
NCBI-GeneID:
107962711
NCBI-ProteinID:
XP_016754680
UniProt:
A0A1U8PU54
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Position
A06:16814549..16824878
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AA seq
705 aa
AA seq
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MLKTTGATFLAIATSFFILHFSPPPKSYYHSLFISSSLSDNASISHHLRTLTRRPHVAGS
QANAEAASYVLSTLSACNIMAHIVSYDVLLTYPDSRSLTLTPSPSEPPITFDLKQEIYEG
DPYADVADEVLPTNHAYAKSGSVVGPVVYVNYRRVEDYGTLKEMGVNVTGTVALARYGEI
FRGDIVMNAFEAGAIGALVYTDRKDYGGEGGDAKWFPDDKWMPPSGVQVGTVYNGSGDPT
TPGWASSEGCERVSVEEVESSGDVPLIPSMPISGADGETILRSIGGQIAKDNWQGSKDAP
TYRVGPGPGVVNLEYNGKQVIATIQNVMGVIEGVEEPDRFVILGNHRDAWTFGAVDPNSG
TAALLEVAQRLQKLQRSGWKPRRTIILCNWDAEEYGLTGSTEWVEENRELLASRAVAYLN
VDCAVSGAGFHASGTPQLDDLLKLATQQVQDPDNSSQTIYEQWIQSTESSLIGRLGGAGS
DYAAFLQHIGVPAADMRFGAGYPVYHSMYDDYTWIENFGDPMFHRNVAVASVWGLVALRL
ADEEFLPFNYHSYALELQKRAEDLENEMSDKGITFSPLFKSIEELSKAARKINYQKKEIK
EAKGWTSMWRNDHVKLRELNDRLMMAERAFTDCDGLLRRPWYKHLIYAPSRHNDYGSTSF
PGIDDAIENAKNLNTAESWHVVQHEVWRVARAVKHASLVLDGKLT
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaccaccggagccacgttcctagccatagccacctctttctttattctccac
ttttctccccctccaaaatcatattatcactcgctgtttatatccagttccctgtccgat
aatgcctccatatctcaccacctccgcaccctcacccgccgcccacatgttgcaggctcc
caagccaacgctgaggctgcatcctatgttctatcaacactctccgcttgcaacatcatg
gcacacatcgtctcctatgatgttttactaacctacccagattcacgttcgctgactctg
acaccttctccttcagaaccgcctataacttttgatctcaagcaggaaatatacgagggt
gatccctatgcagatgtggctgatgaagtgctgcctactaaccacgcatatgccaagtct
ggttcggttgtcgggccagtggtttatgtgaactataggcgggtggaggactacggtaca
ttgaaagaaatgggagtgaacgttactggtactgtggctttggcgagatacggagagatt
tttaggggagacattgtgatgaatgcgtttgaagctggtgctataggggcattggtgtat
actgataggaaagattatggaggtgagggaggtgatgcaaagtggtttcccgatgacaaa
tggatgccgccgagtggggttcaggtgggaacagtctataatgggtctggtgaccccact
acgcctggatgggctagcagtgaagggtgtgagagggtgtcagttgaggaggtggagagc
agtggagatgttcctttaataccctcgatgccgatatctggtgcggatggtgaaacaatc
ttgaggtcaatcggtggacaaattgcaaaagataattggcagggaagcaaagatgcccca
acttacagagttggaccaggaccaggagttgtgaatctcgagtacaatgggaaacaagtc
atagcaacaattcaaaacgtcatgggtgttattgaaggagtggaggagcctgatcggttc
gtcattctgggcaatcatcgtgatgcatggacatttggagctgttgatcccaacagtggt
accgcagcactgctagaggttgcacaaagactccagaaactacaaagaagcggttggaaa
ccacgacgaacaattattttgtgcaattgggatgctgaggagtatggcttgacaggatcg
acagaatgggtagaagaaaacagagaattgttggcttcaagggcagttgcatacttaaat
gttgactgcgcggtatctggagcaggatttcatgcttctggaactccacaacttgatgat
ctgctcaaactagctacacaacaggttcaagatccagataactcatcacaaacaatctac
gaacaatggattcagtccactgagtcttctctgattggacgattaggaggagcaggttct
gattatgcagcttttctgcaacatattggtgttccagcagctgacatgcgtttcggagca
ggatacccagtatatcactcaatgtatgatgactacacctggattgaaaattttggggac
ccaatgtttcatagaaatgttgcagtggctagcgtttggggtttagttgctcttcggctg
gcagatgaagagttcttgccttttaattatcactcctatgcattggaactccagaagcgt
gcagaagacctggaaaatgagatgtcagataagggcataaccttttctcccttgttcaag
tctatcgaggagctatcaaaagcagccagaaagataaattaccagaaaaaggaaataaaa
gaagctaaaggttggacatcaatgtggagaaacgaccatgtcaaattacgtgaactaaat
gatagactaatgatggcagaacgggcatttacggactgtgatggacttcttagaaggcca
tggtacaaacacttgatttatgcaccatcaaggcacaatgattatggatctacatccttc
ccaggaatagatgatgcaattgaaaatgcaaagaatctgaacactgccgaatcatggcat
gtggtgcaacatgaagtttggagagttgctagagctgtcaagcatgcctccttagtcctt
gatggaaaactcacatga
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