Gossypium hirsutum (upland cotton): 121209481
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Entry
121209481 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC121209481 isoform X1
KO
K12865
polyglutamine-binding protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121209481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
121209481
Spliceosome [BR:
ghi03041
]
Complex B
Other components
Prp19 complex
121209481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
121209481
NCBI-ProteinID:
XP_040936112
LinkDB
All DBs
Position
A11:120817331..120823735
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AA seq
466 aa
AA seq
DB search
MEDHFRNENPVPHVLLHEQEIATQKIIQAQSQREAAAGRPCKDGMDVFLERPDPNALKEH
LLKMASEHRAELASKRGKPNPPEQGNIDIGNGYGVPGGGAYSYGTPGSNIATPGNLGHVN
NDTSEKNSEAASKDLPEYLKQKLKARGILKDGSTKHDLSRTDKNLETDAPQLMETAKLPP
GWVCINGQLCAFAFNLVSVEAKDPSSGASYYYNESKGKSQWERPVETSSSTHFPFATRHV
EDWVEAVDETTGRKYYYNTKTNISQWECPDVLKPFASQHPGSMVSESTVNENSTVWSSNL
DKCFGCGGWGVSLVQAWGYCNHCTRVLNLPQAQSLPATLDYQQHNSNENKASKPRSGGRP
PSGKGNRKDFGKRKHSYNDDDELDPMDPSSYSDAPRGGWIVGLKGVQPRAADTTATGPLF
QQRPYPSPGAVLRKNAEIASQTKKSSSHWTPVSKKGDGSDGLGDAD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaagaccattttcgcaatgaaaatccagtacctcatgtccttctccacgaacaagaa
atcgccacccagaaaattatccaggctcagagccagagagaggcagcggccggacgtccc
tgcaaggatggtatggacgttttcttggaacggcctgatcccaatgctttgaaagagcat
ctactgaaaatggcttcagagcatcgtgccgaactagcttctaagcgtggcaagcctaac
cctcctgaacaaggtaacatagacattggaaatgggtatggtgtaccaggtggaggtgct
tatagctatggtactccaggttctaatattgctacaccaggaaatttgggacatgtaaat
aatgatacaagtgagaaaaattctgaggctgcatctaaggacttgcctgagtaccttaag
caaaagttgaaagctaggggcattctaaaagatggttcaacaaaacatgacctatcaaga
accgataagaatttggagactgatgcaccccagcttatggaaactgcaaagttgcctcct
ggatgggtgtgtatcaatggccagctttgtgcttttgcatttaatctggtttctgtggaa
gcaaaagatccctcctctggtgcttcatattattacaatgaaagtaaaggaaagagtcag
tgggaaagacctgtagaaacatcttcgagtactcatttcccattcgctacaagacacgtg
gaagattgggtggaagcagtagatgaaacaacagggcgcaaatattattacaatacaaag
accaatatatctcaatgggagtgccctgatgtattaaagccgtttgcatcacagcatcct
ggaagcatggtttctgaaagtactgttaatgagaattcgactgtgtggtcatcaaacttg
gacaaatgctttggttgtggaggttggggagttagcctggtgcaagcttggggttactgc
aatcattgcacacgagttctcaatctgccacaggcccagagtttgccagcgactttggat
taccagcagcataatagcaatgagaataaggcttctaagccaagatccggagggagaccg
ccttcaggaaaaggaaacagaaaagacttcgggaaaaggaagcattcctacaacgatgat
gatgagctggacccaatggatccaagctcatactccgatgctcctcgtggtggttggatt
gttgggctgaaaggagtacagccacgagcagctgataccactgccacgggtcctttgttt
caacaacgtccatatccatctcctggagctgtattacggaagaacgcagaaatagcttca
caaacaaagaaatcaagctcacattggacacccgtatcaaagaaaggggatgggagtgat
ggccttggtgatgcagactaa
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