Gossypium hirsutum (upland cotton): 121210809
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Entry
121210809 CDS
T04793
Name
(RefSeq) probable DNA helicase MCM9 isoform X1
KO
K10738
DNA helicase MCM9 [EC:
5.6.2.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ghi03032
]
121210809
03400 DNA repair and recombination proteins [BR:
ghi03400
]
121210809
Enzymes [BR:
ghi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
121210809
DNA replication proteins [BR:
ghi03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
121210809
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121210809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA
MCM_N
Sigma54_activat
AAA_22
AAA_16
FtsK_SpoIIIE
VapE-like_dom
Motif
Other DBs
NCBI-GeneID:
121210809
NCBI-ProteinID:
XP_040938367
UniProt:
A0ABM2Z6M5
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All DBs
Position
A12:2115365..2130497
Genome browser
AA seq
667 aa
AA seq
DB search
MNSCNEEEVPMRLHSAVEYLLHSHSDQLRSIILSPDPKLHYPLFVDYAELMDADPPLARL
VFANPTDYLRFFDQAAILAHKRVLKDMVSHEKGVEKKFIHVRFNVCGSPLEFPETFPTIG
RVRVKHRGILLTLKGTVIRSGAVKMYEGQRTYQCKKCKHMFPLYPELETRNSITLPSICP
SQRSNPCEGTKFLCIENTTVCHDYQEIKIQESTQVLGVGVIPRSILVILQDDLVDIVKAG
DDVIITGILTAKWSPDLKDVRCDLGPILIANHVRKTNEMKLEIDIPDDVAMKFKQFWLDF
RDTPLKGRNTILRGICPQVFGLFTVKLAVALTLIGGVQHVDASGTKIRGESHLLLVGDPG
TGKSQFLKFAAKLSNRSVITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDE
FDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTIVFGATNPKGHYDPDQPLSVNTAL
SGPLLSRFDIVLVLLDTKNPEWDAVVSSHILGEGEYGNGKQDEDLANIWSLSILRGYIGY
VKKHFKPVLTKEAERVISNYYQLQRRSATHNAARTTVRMLESLIRLAQAHARLMFRNEVT
RLDAIAAILCIESSMTISAIIDSIGNALHSNFTENPDEEYAKQEKLILEKLSLIDESPES
NGLEGFN
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaattcctgtaatgaagaggaggtgcctatgcgactgcattcggcggtggaatatctg
ctacattcccactccgatcagctccggtctatcattctctcccctgaccctaaacttcac
tatcctcttttcgtcgattatgccgagctgatggatgctgatcctcctctagcccgcctc
gtcttcgccaacccaactgactatttgagattctttgaccaagccgccattttggctcat
aaaagagtactgaaagacatggtatcgcatgagaagggagttgaaaagaaattcattcat
gttcgtttcaatgtctgtggttctcctcttgaattccctgagacttttccgactattggg
cgtgtgagggtgaaacatcggggaattcttcttactctcaaagggactgtaattcgatct
ggagcggtgaagatgtatgaggggcagaggacatatcagtgcaagaaatgcaagcacatg
tttcctctttatcctgaacttgaaacaagaaactcaataacacttccgtcaatctgcccc
tctcagaggtccaatccttgcgaaggcactaaattcctctgtatagaaaataccacggtc
tgtcatgattaccaggaaataaaaattcaagaaagcacacaggttttgggtgttggtgta
atcccccgttcaattctagtcattcttcaagatgatcttgttgacattgttaaagctgga
gatgatgtaatcattacagggatcttgactgctaagtggtctcctgatttaaaagatgta
cgatgcgatcttggtcccatattaattgccaaccatgtgaggaaaactaatgagatgaaa
ttagagattgatatcccggatgatgttgctatgaaattcaagcaattctggttagacttt
agagacaccccattgaaaggaagaaatactattctacgaggaatttgcccacaagttttt
ggactcttcactgtgaaacttgcagttgctctcacactgattggaggtgttcaacatgtt
gatgcttctgggacaaagattcgaggagagtctcacttgcttctggttggtgacccaggt
actggaaagtctcagttcttgaaatttgctgctaaattaagcaaccgatctgtcatcact
actggcttgggaagcactagtgctggactgactgttactgcagtcaaggatggtggggag
tggatgctagaagccggggcccttgttttagctgatggaggcctttgttgcattgatgaa
tttgatagtatgagagaacatgacagggcaaccattcatgaagcaatggagcagcagact
ataagtgttgcaaaggctggccttgtcactactcttagtaccaggacaattgtcttcggt
gcaacaaatcccaaaggacactatgatcctgatcaacctctctctgtcaatacggcactc
tccggtcccttactaagtagattcgatattgtccttgtgctcttggatacaaagaaccct
gaatgggatgcagttgtatcatcacacattctgggtgagggagaatatggaaatggcaag
caggatgaagatctagcaaatatctggtcactttctatcctccgggggtatattggctat
gtaaaaaaacactttaaaccagtgcttacaaaagaggctgaaagggttatctcaaactat
tatcaactccaaaggagatcggccacacataatgcagcaagaacaacggtgcgcatgctt
gaaagcttgatacgcctggctcaagctcacgcaaggcttatgttcagaaatgaggtcact
agattagatgccattgcagccattttatgcattgaatcatccatgactatctccgcaatt
atagatagcatagggaatgccctgcactccaatttcaccgagaacccagatgaggaatat
gccaagcaagaaaaattaattcttgaaaagttaagtttgatcgatgagtccccggaatca
aacggcttggaaggtttcaactga
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