Gossypium hirsutum (upland cotton): 121225246
Help
Entry
121225246 CDS
T04793
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121225246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
121225246
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121225246
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121225246
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-RING_11
Prok-RING_4
zf-RING_4
DUF8149
Motif
Other DBs
NCBI-GeneID:
121225246
NCBI-ProteinID:
XP_040965405
UniProt:
A0ABM3BEC2
LinkDB
All DBs
Position
D13:complement(61609406..61614935)
Genome browser
AA seq
315 aa
AA seq
DB search
MSFSMEEVEIKHSGAKELSYQQQNESYEVFEEEVRGSFSPQSGGNRVDKQESNDAEATEL
LDKGFMEYGCPHYRRRCRIRAPCCGEIFDCRHCHNEAKNNINVDQKLRHDLPRRQISKVI
CSLCGTEQEAQQVCINCGVCMGKYFCNSCKLFDDDTSKRQYHCDGCGICRIGGQENFFHC
HKCGCCYSILLKKSHPCVEGAMHHDCPICFEFLFESRQNVTVLPCGHTIHTNCFKEMRDH
FQYACPLCSKSVCDMSKVWEKFDEEIAATPMPEQYQNKMVSILCNDCETKSLVRFHVLAQ
KCPNCKSYNTRQTRG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcattttcaatggaagaagtggaaattaagcattctggagctaaagagcttagctat
cagcaacaaaatgaaagctacgaagtatttgaagaagaggtgaggggatcattctcacca
cagtcaggtggaaaccgtgtggataaacaagaatcaaatgatgcagaagcaactgaattg
ctggacaaggggtttatggagtatggttgcccacattatcgaagaaggtgccggattaga
gctccctgttgtggtgagatatttgattgtcgtcactgtcataatgaggcaaagaacaat
atcaatgttgaccagaagctcagacatgatctcccacgccgtcaaatcagtaaggttatt
tgttctctatgtggcacagaacaagaggctcaacaagtttgcatcaactgtggtgtttgt
atggggaagtatttctgcaactcctgcaaactttttgatgatgatacatcgaagagacag
tatcattgtgacggttgtgggatctgtaggattggagggcaggagaacttcttccattgc
cacaagtgtggttgctgctattcaattcttctgaaaaaaagccatccctgtgttgaagga
gcgatgcaccatgactgtcccatatgctttgagttcttgttcgaatcgagacagaatgta
actgttctgccatgcggacatacaattcacacaaattgtttcaaggaaatgagggaccat
ttccaatatgcctgccctctgtgctccaaatcggtttgtgacatgtcaaaggtctgggag
aaattcgacgaggagatcgcagctacaccaatgccggaacagtaccaaaacaaaatggtc
tcgatcctttgcaacgattgcgagacaaaatctctagttcggtttcatgtcctggctcag
aaatgcccgaattgcaagtcatacaatactaggcaaacacgaggctga
DBGET
integrated database retrieval system
