Gossypium hirsutum (upland cotton): 121225293
Help
Entry
121225293 CDS
T04793
Name
(RefSeq) homogentisate phytyltransferase 1, chloroplastic-like isoform X1
KO
K09833
homogentisate phytyltransferase / homogentisate geranylgeranyltransferase [EC:
2.5.1.115
2.5.1.116
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00130
Ubiquinone and other terpenoid-quinone biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01240
Biosynthesis of cofactors
Module
ghi_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
121225293
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
ghi01006
]
121225293
Enzymes [BR:
ghi01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.115 homogentisate phytyltransferase
121225293
2.5.1.116 homogentisate geranylgeranyltransferase
121225293
Prenyltransferases [BR:
ghi01006
]
Compound prenylation
HGA prenyltransferase
121225293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
Motif
Other DBs
NCBI-GeneID:
121225293
NCBI-ProteinID:
XP_040965471
LinkDB
All DBs
Position
D13:62769905..62776510
Genome browser
AA seq
405 aa
AA seq
DB search
MDALILGSSTGGLSLFISGRSSWRSKDLKAVHFPNSSIRVQVPTYKSYNLVGNFYTKRIQ
HRARGILETSTVFQKSNTKFLVNATSGHPLESEPKAYPNTPWNSAKNALDAFYRFSRPHT
VIGTALSIISVSLLAVEKLSDISPLFFIGVLEAVVAALFMNIYIVGLNQLSDVEIDKVNK
PYLPLASGEYSTLTGIMIVTSFSITSFWLGWVVGSWPLFWALFVSFVLGTAYSINLPLLR
WKRFALVAAMCILAVRAVIVQLAFYLHIQTHVFSRPAVISKPLIFATAFMSFFSVVIALF
KDIPDIEGDKIFGIKSYTVRLGQEKVFWTCISLLEMAYGVSILVGATSPYTWSKVITVLG
HSVLASILWIRAKSIDLKSKAAITSCYMLIWKLFYAEYFLIPLIR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttaattcttgggtcctctactggaggactatctttgttcatctctggaagg
agtagctggaggagtaaagacttgaaggctgtccattttccaaattcttctatacgagtg
caagtgccaacatacaagtcatataacctcgttggaaacttttatactaaaaggattcag
catcgtgcaagaggtattctggaaacatctacagtcttccagaaaagtaatacaaagttt
ctagtgaatgccacttctggtcatccgcttgaatcagaacccaaagcttaccccaatacc
ccatggaattctgctaaaaatgcattggatgctttttacaggttttcacggccccatacc
gttataggcacagcactcagcatcatttcagtttctctccttgctgtcgagaagttatcg
gatatttctcccctgttctttattggggtattagaggctgtagttgctgctcttttcatg
aatatttatatcgttggtctgaatcagttgtcagacgttgagattgacaaggttaacaag
ccttatcttccattggcatcgggagagtattcaacacttaccggcatcatgattgtcaca
tcattttccatcacgagcttttggcttggatgggttgttggttcatggccattgttttgg
gcactttttgtcagttttgtgcttgggactgcatattcaatcaatttgccactattacga
tggaaacggtttgcattggttgcagcaatgtgcatcctagctgtcagagccgtgattgtt
caacttgctttttatcttcacatacagacccatgtattcagcagaccagctgtcatttca
aagcctctaatttttgctactgcattcatgagcttcttctcagtagttatagcactattt
aaggacattcctgatattgaaggagataaaatatttggaatcaaatcttacacagtacgt
ctgggtcaagaaaaggtgttttggacttgtatttcgcttcttgaaatggcgtacggtgtt
tctattttggtcggagcaacatcaccctacacctggagcaaagtcatcactgttttgggt
cattctgtcttagcttcgattttatggatccgtgccaaatccatcgacttgaagagcaaa
gctgcaataacatcatgttatatgcttatttggaagctcttttatgccgagtacttcctt
ataccacttataagatga
DBGET
integrated database retrieval system
