Grimontia hollisae: AL542_00505
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Entry
AL542_00505 CDS
T04260
Symbol
rumB
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
gho
Grimontia hollisae
Brite
KEGG Orthology (KO) [BR:
gho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gho03009
]
AL542_00505 (rumB)
Enzymes [BR:
gho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
AL542_00505 (rumB)
Ribosome biogenesis [BR:
gho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AL542_00505 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Methyltransf_11
Cons_hypoth95
TRM5-TYW2_MTfase
Couple_hipA
TehB
Motif
Other DBs
NCBI-ProteinID:
AMG28968
LinkDB
All DBs
Position
2:114573..115712
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AA seq
379 aa
AA seq
DB search
MHCKFFEQNQCRSCERMGVPYTQQVAEKDSALKALFANRLPEQWLPPVLSEETGCRNKAK
MVVLGAAHQPVLGADVRGGEAPEWVSLTHCPLYTQDMQALLDYLQDWIRTSGIPPYNKAK
KKGELKFILLTRAAHTGEFMLRFVMRSREALPRVNANLARLCDAFPAIRVVSVNLQPVHM
ARLEGDEEIYLTEEQHLIERFNDVPLVVRPKSFFQTNPDIAAKLYATAREWVKEIAPARM
WDLFCGVGGFALHCAPVAGAVTGIEIEPEAIASAKRSAAEIGISNLDFDALDSAAFSLCH
DTAPDLVLVNPPRRGLGQTLVTQLAQLSPKHIIYSSCNPDTLRSDLDGFDGYAVKRLQWF
DMFPHTRHAEVMVLLEKRG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcaaattcttcgaacagaaccagtgccgttcctgcgaacggatgggcgtgcct
tacacacagcaggtcgcagaaaaagacagcgcgctgaaagcgctgtttgcgaaccggttg
cctgagcagtggttgccgccagttctgagcgaagaaaccggctgccgcaacaaagccaaa
atggtggtgctgggtgcggcgcaccagccggtattgggcgcagatgtgaggggcggggaa
gccccagagtgggtaagcctgacccattgcccgttgtatacccaagatatgcaagcgttg
ctggattacctgcaggactggattcgaacctccggtatcccgccttacaacaaggcaaaa
aagaaaggtgaactgaaatttatcctgctgacccgcgctgcgcataccggtgaatttatg
cttcgttttgtgatgcgcagccgcgaagcgctgccgcgtgtgaacgctaacctggcaagg
ttgtgtgacgcctttccggcaatccgggtggtatcggttaaccttcagcctgtgcatatg
gcaaggctggaaggcgatgaagagatttacctgacagaagaacagcacctcatagagcgc
ttcaatgatgtgccgctggtggtgcgccccaaaagctttttccagaccaatcctgatatt
gccgccaagctctatgccacggcccgtgaatgggtgaaagaaattgcacctgcccggatg
tgggatctgttttgtggtgtagggggttttgcgctgcattgtgcgccggtggctggtgcg
gtaaccggtattgagattgaaccggaagccatcgccagtgctaaacggtcggcggcagaa
ataggcatttccaacctggattttgatgcactggattcggcggctttctccttgtgccac
gatactgcgccggatttggtgctggtcaatccgccccggcgggggctgggtcagacactg
gttacccagttggcgcaactgtcgcccaaacacattatctactcaagctgtaaccctgat
acgctgagaagtgatcttgacgggtttgatggttacgcggttaagcgcctgcaatggttt
gatatgttcccgcacacaaggcatgcggaagtaatggtgctgctggaaaagcgcggctga
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