Gilvimarinus sp. DA14: NHM04_01475
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Entry
NHM04_01475 CDS
T08272
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NHM04_01475 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gil03400
]
NHM04_01475 (nth)
Enzymes [BR:
gil01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NHM04_01475 (nth)
DNA repair and recombination proteins [BR:
gil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NHM04_01475 (nth)
Prokaryotic type
NHM04_01475 (nth)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Transposase_20
DUF2400
Motif
Other DBs
NCBI-ProteinID:
UTF60493
UniProt:
A0A9J7A652
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All DBs
Position
complement(363690..364364)
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AA seq
224 aa
AA seq
DB search
MEVAAKNLNKAERVALIQQTLNQLYPAPPIPLDHFDAYSLLVAVLLSAQCTDERVNQVTP
SLWALADNPFDMAKVPVEQIQSVIRPCGLSPQKSKAISVLSQRLVAEYNGMVPADMEALE
SLPGVGHKTASVVMAQAFGVPAFPVDTHIHRLAQRWGLTSGKNVVQTERDLKRLFPKDAW
NKLHLQIIFYGREHCTARGCDGRVCGLCRACYPARKHPKKVHKP
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagcagctaaaaacctgaacaaggccgagcgcgtagcgctgattcagcaaaca
ctgaatcaactctaccccgcgccgcctattccactggatcattttgacgcctacagcctg
ttagtggcggtgctgctttcagcgcagtgcaccgatgagcgggtcaaccaggtcactccc
agcctctgggcgctcgccgataacccctttgatatggcgaaggtgcccgtggagcagatc
cagtcggtgattcgcccctgcggcctgtcgccgcaaaaatccaaggcgatatccgtgctc
agccagcgtctggttgcggagtacaacggcatggtcccagctgatatggaagcgctggaa
tcactgccgggcgttggccacaaaaccgccagtgtagtcatggcccaggctttcggggta
cccgccttcccggtcgatacgcatattcacagactggcacaacgctggggactcaccagc
ggtaaaaatgtggtgcaaaccgagcgagacttgaagcgcctgttccccaaagatgcctgg
aataagctgcatttacagattattttttacggccgtgaacactgcaccgcacgcggctgc
gacggtcgcgtatgcggcctgtgccgtgcctgctacccggcgcgcaaacatccgaaaaag
gtccataaaccttag
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