Gilvimarinus sp. DA14: NHM04_06370
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Entry
NHM04_06370 CDS
T08272
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gil
Gilvimarinus sp. DA14
Pathway
gil01501
beta-Lactam resistance
gil01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gil00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NHM04_06370
01503 Cationic antimicrobial peptide (CAMP) resistance
NHM04_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gil03036
]
NHM04_06370
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gil02000
]
NHM04_06370
01504 Antimicrobial resistance genes [BR:
gil01504
]
NHM04_06370
Chromosome and associated proteins [BR:
gil03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
NHM04_06370
Transporters [BR:
gil02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NHM04_06370
Antimicrobial resistance genes [BR:
gil01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NHM04_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND_2
BSH_CzcB
YknX_C
HH_EMRA
BSH_CusB
BSH_YknX
Beta-barrel_RND
Biotin_lipoyl
BSH_LcnD
RND-MFP_C
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
UTF61418
LinkDB
All DBs
Position
complement(1432073..1433206)
Genome browser
AA seq
377 aa
AA seq
DB search
MLNLFRKIVSGVPRVCGLLVLCALALLGCSESEPARQARAETQARPVIAARISYAPERVE
VEAVGTSRALRSVSIRPRVAGQIESVHIQPGQKVTKGDVLFSLDSRDEALALRNAQLELA
DAERLLQRYRQTKDSGAVTQSALDDADSAVARARIAVDRSQVNLAYQQVLAPFTGYVGFT
DIDPGAWVDTSTALTTLDDRSQLLVTFSLPELLLGQIDVGQEIELSTWRQKDAIAAGEVV
EIDSRVDDSERMFRVRAHVDNSDDTLRPGMSFRIALSLLGNEYALVPEVSLQWGARGSYV
WAVVDGVAQRRVATIVQRLAGKVLVDVNLPEGALVVLEGIQMLREGMPVRVDQVVNADGV
PVANAASAADSAEVSGD
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttgtttcgcaaaattgtttcgggcgtaccgcgagtatgcggcctgctggtg
ctatgcgctctagccttgcttggttgctcggaatcagaacctgcgagacaggccagagct
gaaacgcaagcccgaccggtgattgcagcgcgcattagctatgcgccggagcgggtcgag
gtagaggctgttggaacttcgcgtgctctgcgctcggtaagtattcgtcctcgcgtggct
gggcagatcgaaagtgtgcatattcaaccgggacagaaagtaactaagggcgatgtgttg
ttcagtctggacagtcgcgatgaggccctggcactgcgcaatgcgcagttggagcttgcc
gatgccgagcgtttgttacagcgctatcgtcaaaccaaggacagcggcgctgtcactcag
tcggctctggacgatgccgatagcgccgtggcgcgagcccgtattgctgtggatcgctct
caggttaacctcgcctatcagcaagtattggcgcctttcactgggtatgtaggttttacc
gatatcgatcctggtgcctgggtggacaccagcacggctttgacgacattggatgatcgc
agccagttattggtgacattttcactgcccgagttactgctggggcaaattgatgtggga
caggaaatcgagttgtctacttggcgccaaaaagacgctatcgccgcaggcgaagtagtg
gaaattgacagcagggtggatgacagcgagcgcatgtttcgtgtgcgcgcccatgtggat
aacagcgatgacactctgcgcccgggtatgagctttcgcattgctttgagcctgttgggt
aacgagtatgctttggtgccggaggtgtctttacagtggggcgcccgaggctcctatgtg
tgggcagtggtcgatggcgtggcacagcggcgagtggccactattgtgcagcgtttagcc
ggtaaggtattggtcgatgtcaacttacctgaaggagcgttggtggtactggaaggtatt
caaatgctacgcgaagggatgcccgtgcgggtggatcaggtggtgaatgctgatggcgtg
cctgtggctaatgccgcaagcgcagcagacagtgccgaggtgagcggtgactga
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