Gimesia benthica: F1728_02910
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Entry
F1728_02910 CDS
T06296
Name
(GenBank) class I tRNA ligase family protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
gim
Gimesia benthica
Pathway
gim00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
F1728_02910
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gim01007
]
F1728_02910
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gim03016
]
F1728_02910
Enzymes [BR:
gim01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
F1728_02910
Amino acid related enzymes [BR:
gim01007
]
Aminoacyl-tRNA synthetase
Class I (U)
F1728_02910
Transfer RNA biogenesis [BR:
gim03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
F1728_02910
Prokaryotic type
Other AARSs
F1728_02910
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
tRNA-synt_1f
YlqD
Motif
Other DBs
NCBI-ProteinID:
QGQ21701
UniProt:
A0A6I6A9M0
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All DBs
Position
732157..735705
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AA seq
1182 aa
AA seq
DB search
MFQKVTDASFIKGEHEILKFWEENQTFTQLRRKNQGKPKWSFLDGPMTANNPMGVHHAWG
RTYKDAYQRYYAMTGHELRYQNGFDCQGLWVEVEVEKELGYGTKQEIVSHGIDKFVNECK
KRVLKFAARQTEQSVRLGFWMDWDNPDQLRELAQSVGEETEVTITTPSGKQVTDRADMLV
SRLGNAEWGGSYFTFSTENNETIWTFLKKCYERGKVYRGHDVMPWSGRGGSAYSQMEVAD
GRKLSVHKSIFVRFPLKDRENEFLLIWTTTPWTLTSNVAAAINPDLEYVKLKAKKDDAIY
YFAKDNLEYQRLSREYKEGFGRPEWSWPKDVPKLKTLAQIFKEQGGYEIVDTIKGAEMVG
WEYTGPFDNLPAQQTPGGYPSDDNLLNQSGISCHKVVDGGRDFKGNPHVVAGEGTGIVHT
APGCGDVDHQLGKQLGLVAIAPLGEDGRFEEGFGEFTGMEAIDPATPELVFEKLKEKGLL
VSVEQYPHIYPHCWRTGDELIFRLVDEWFINMDWREEIKDITRQIDWVPSSIDGEQHELE
WLTNMRDWMVSKKRFWGLALPIWVDEETGDFEVIGSLDELKERAVEGWEALEGHTPHRPW
IDQVKLKNPKTGNLMTRIPDVGNPWLDAGIVPFSTMQYNTNPEEWEKWYPADLVTECFPG
QFRNWFYALLSMATMMDGTPPFKTLLGYRLVLNEEGKPMHKSDGTAIWFEEAAEQLGVDT
MRWMYLAHNPASDLRFGMRNPDEQVTLETPEGPISETREGAPTCLVESKPADEIRRQVLI
PLWNSYAFFVNYARLDEFDPSQAAVPVADRPEIDRWILSNLQALLVSAKTEIEAYNYAGF
LKNATTFIDDLSNWYIRRNRRRFWRSQDANDTDKLAAYQTLYEVLVTLSQALAPVIPFLT
ERIYQNLVTSWDKSAPTSVHLCDFPTCDTTLLDEKLNFRSAQAQIMVKLGHKLRDESNQR
VRQPLAELRYACQTPEQAEAIESLASTVEEELNIKQVTRCENLDELVSYTYKPNLKTLGP
KFGKLLGVLRKELPELGDDVLGPLRRGESVSLELAGNQIDLEPDDVLVGTEQAADWASAD
EQGIQIAISTKLTPELEQEGMARDFVRQIQQLRKEADLEIEDRIIVTYDSQGAAEIEQAV
SNWTDYILGETLGDQLDQSQSLTDGKEVTIGNVKALITIQKV
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaaagttactgatgccagcttcatcaaaggtgaacacgaaatcctcaaattc
tgggaagagaaccagacgtttacccagctccgccggaagaatcagggaaaacccaaatgg
agttttcttgacggtccgatgaccgccaacaaccccatgggcgtgcaccatgcctgggga
agaacctacaaagacgcctatcaacgctattacgcgatgacgggccatgaactccgctac
cagaacggcttcgactgtcaggggctctgggttgaagtggaggtcgaaaaagagctggga
tatggcaccaaacaggaaatcgtttctcacgggatcgataaattcgtcaacgaatgtaaa
aagcgggtactgaagttcgccgctcgtcagaccgagcagtctgtacgactgggcttctgg
atggactgggacaatccagatcagttacgcgagctggcgcagtccgttggtgaagagacc
gaagttaccatcaccacccccagcggaaaacaggtgactgaccgggcagacatgctggtc
tcacgtctggggaatgcggaatggggcggaagctacttcaccttctccacggaaaacaat
gaaaccatctggaccttcctcaagaagtgctatgaacgggggaaggtttatcgaggacat
gacgtgatgccctggtccggacgcgggggcagtgcctacagccagatggaagtggccgat
ggtcgtaagctctctgtccacaaatccatcttcgtccgcttcccactgaaagaccgggaa
aacgaattcctgctgatctggaccaccaccccttggacattgaccagtaacgtggcagca
gcgatcaatccggatctggaatacgtcaaactcaaggcgaaaaaagacgatgcgatttac
tacttcgccaaggacaacctcgagtatcagcgactgagtcgtgagtacaaagaaggcttt
ggacgccccgagtggtcctggcccaaagatgttcccaaactgaaaaccctggctcagatt
ttcaaagagcaggggggatatgagattgtcgacaccatcaaaggtgcagagatggtgggc
tgggaatacacaggtcctttcgataatctgcctgcacaacagactcccggcggatacccc
agtgacgataatctgctgaatcaaagtggaatttcctgccacaaggttgtcgatggtgga
cgcgattttaaaggaaacccgcatgtagtcgccggtgagggaaccgggatcgtacatacc
gcccctggctgtggtgatgtcgaccaccagcttggcaaacaactcgggctggtcgcgatt
gcaccgctgggcgaagatggtcggttcgaggagggctttggcgaattcactggaatggaa
gccatcgatcctgcgactccggaactggtcttcgaaaagctcaaagagaaaggcctgctg
gtttcagtcgaacagtacccccacatctatccgcattgctggcggacgggcgatgaactg
attttccgcctggtagatgaatggttcattaacatggactggcgcgaagagatcaaagat
atcacccgccagatcgactgggtcccttccagtatcgatggggagcagcacgaactcgaa
tggctgaccaacatgcgcgactggatggtctccaaaaaacgattctggggcctggcactg
ccgatctgggtagacgaggaaactggtgatttcgaagtcattggatcccttgatgaactc
aaggaacgtgctgtagaaggttgggaagcactcgaggggcacacgccgcatcgcccctgg
atcgatcaggtgaaactgaaaaaccccaagaccgggaacctgatgacccgtattccggat
gtgggaaatccctggctggatgcaggcatcgtgcctttctccacaatgcaatacaacacc
aacccggaagagtgggagaaatggtatccggctgacctggtcaccgaatgtttccccggt
cagttccgcaactggttctatgccctgttatcgatggccaccatgatggatgggactcct
ccattcaaaacactgctgggatatcgcctggtgttgaatgaggaaggcaaacctatgcac
aaatcagatggaaccgccatctggtttgaagaagcagccgagcaattgggcgtcgacaca
atgcgctggatgtacctggcacataaccccgccagcgatctgcgttttggaatgcggaac
ccggacgagcaggtcacgctggagactccggaaggcccgatctcagagacccgcgaagga
gcaccaacctgtctggttgagagtaaacctgccgacgaaatccgtcgccaggtattaatc
cctctctggaactcctacgcattctttgtgaactacgcacggctggatgaatttgatcct
tcacaggctgccgttcctgttgcagatcgtcctgaaattgaccgctggattctgtccaac
ctgcaggctctgctggtctctgccaagaccgagatcgaagcctacaattatgccggcttc
ctcaagaatgcgacaacgtttattgacgatctttccaactggtatatccgtcggaaccgt
cgtcgattctggcgttcacaggatgccaatgacacagacaaactggctgcctaccagact
ctttatgaagttctggtcacgctttcgcaggcactggctccggtcatcccgttcctgacc
gaacgcatttatcagaacctggtaaccagttgggataagagtgctcccaccagcgtgcac
ctttgtgattttcccacctgtgacaccacactgctggatgagaaactcaacttccgctca
gctcaggctcagattatggtcaagctgggacacaagctgcgggatgaatcgaatcagcgt
gtccgtcagccgctggccgagttacgctatgcctgccaaaccccagaacaggctgaagcg
attgaaagcctcgccagtactgtggaagaggaactgaatattaagcaggttacccgttgt
gaaaacctggatgaactggtcagctacacatataaaccgaacctgaaaacactgggtccc
aaattcggaaaactgctcggggtgttgcgtaaggaacttcccgaactgggcgatgatgtt
ctgggccccctgagacgcggtgaatcggtttcactggaactggcgggcaaccagatcgat
ctggaaccggacgatgttctggtgggaacagaacaggctgcagactgggctagtgccgac
gagcaggggatccagattgcgatctcgacgaaactaacaccggagctggaacaggaaggg
atggcccgtgacttcgttcgccagattcaacagcttcgcaaagaagccgatctggaaatc
gaagatcggatcattgtcacatatgattcgcagggggcagcagagatcgaacaggctgtt
tccaactggactgattacatcctgggagaaaccctcggagatcagctggatcagtctcag
agcctgacggatggcaaagaagtcaccatcggaaatgtgaaggccctgattacaattcag
aaagtgtaa
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