Gimesia benthica: F1728_03980
Help
Entry
F1728_03980 CDS
T06296
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gim
Gimesia benthica
Pathway
gim01501
beta-Lactam resistance
gim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1728_03980
01503 Cationic antimicrobial peptide (CAMP) resistance
F1728_03980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gim03036
]
F1728_03980
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gim02000
]
F1728_03980
01504 Antimicrobial resistance genes [BR:
gim01504
]
F1728_03980
Chromosome and associated proteins [BR:
gim03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F1728_03980
Transporters [BR:
gim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F1728_03980
Antimicrobial resistance genes [BR:
gim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F1728_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
YknX_C
Beta-barrel_YknX
BSH_RND
BSH_CzcB
RND-MFP_C
Beta-barrel_AprE
HH_CzcB
CzcB_C
Beta-barrel_RND
Biotin_lipoyl
BSH_CusB
BSH_YknX
DUF2514
HH_MFP_RND
Motif
Other DBs
NCBI-ProteinID:
QGQ21900
UniProt:
A0A6I6A7M6
LinkDB
All DBs
Position
987144..988346
Genome browser
AA seq
400 aa
AA seq
DB search
MKVLIAPACTAIAMVVGWLVYDKSVKDVQVPTKTIIPEPIAVQVTRSTTKTLEKRINLVG
NLEAGSQVEVRTRYSGYIKSMPFDVGDRIKEGDVILELNDSENRELVSKAEAALSVAKAQ
LKAQITSQELARKAYDRLLVLQKSGVSTRQQMEEAQASLAIQEAQTELEQARVDQAGADL
EQSRLRLQENKIIAPTSGFLAERLVDIGDLAKPDVALMKIVNLDHVRTVVHIVEKDYEDV
KIGQQAAITVDTFPDQTFSGHVKRKAPVMDPQTRTAAVHIEIPNEDFSLKPGMHARVQIV
FEHRPETKVLPIASLTRRKDGPGSAVFIIGGNPPMTHRRNIEVGINDGEMVEILSGINAE
DLVITLGNRLVDEGQTVTPVEVPMDQILQAPPALPEKTNL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttctgattgcgcccgcctgcacagcgattgccatggttgtcggatggctggtc
tatgacaaatccgtcaaagatgtccaggtcccaaccaaaactatcatccccgaaccgatc
gcagttcaggtcacccgctctactaccaaaaccctcgaaaaacggattaacctcgtcggt
aacctggaagcaggttctcaggtagaagtccggacgcgttacagtggctacatcaagtcg
atgccctttgacgtcggcgaccggatcaaggaaggagatgtcattctggagctgaatgat
tcagagaaccgggaactggtatcgaaggcagaagctgctctcagtgtcgccaaggcacag
ttaaaagcacaaattacttctcaggaactcgcccggaaggcctatgaccgactgctggta
ctgcagaagtcaggcgtcagtactcgtcagcagatggaagaagcacaggccagcctggca
atccaggaagcgcaaacggaactggaacaggcacgcgtcgatcaggcgggagccgatctg
gaacaaagtcgactgcgtttgcaggaaaacaaaatcattgctcccaccagtggatttctt
gctgaaaggctggtcgatattggcgacttggccaaaccggatgtcgcactgatgaaaatt
gttaatctggatcacgttcgcaccgtagtgcatatcgtggagaaagattacgaggatgtc
aaaatcggtcagcaggcggccatcaccgtcgatacgtttcccgaccagactttttcaggc
cacgttaaacgcaaagcgcctgtaatggatccacaaaccaggaccgccgccgttcacatc
gaaattcccaacgaagatttttctttgaagccggggatgcacgcccgcgtgcagattgtc
tttgaacatcgcccggaaaccaaagtactgccgatcgcctcactgacccgccgcaaggat
ggcccgggttctgcagtctttatcattggagggaatcccccgatgacccatcgccgcaac
attgaagtcggtatcaacgatggagaaatggtggagattctctctggtatcaatgcggaa
gatctggtgatcactctgggaaaccgcctggtagatgaaggacagacggtgacacctgtg
gaagtccccatggatcagattcttcaggctcctcccgccctgcccgagaaaacgaacctg
taa
DBGET
integrated database retrieval system
