Gimesia benthica: F1728_05590
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Entry
F1728_05590 CDS
T06296
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gim
Gimesia benthica
Pathway
gim01501
beta-Lactam resistance
gim01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gim00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F1728_05590
01503 Cationic antimicrobial peptide (CAMP) resistance
F1728_05590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gim03036
]
F1728_05590
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gim02000
]
F1728_05590
01504 Antimicrobial resistance genes [BR:
gim01504
]
F1728_05590
Chromosome and associated proteins [BR:
gim03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F1728_05590
Transporters [BR:
gim02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F1728_05590
Antimicrobial resistance genes [BR:
gim01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F1728_05590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
PTS_EIIA_1
LFE_1968-like
Motif
Other DBs
NCBI-ProteinID:
QGQ22194
UniProt:
A0A6I6A703
LinkDB
All DBs
Position
complement(1489227..1490720)
Genome browser
AA seq
497 aa
AA seq
DB search
MLRRQSTGIWASIPSVLFSAIAWIARCLCSIPGNRFPSCLANRRPSERALMQESSGGITR
ITGPRFPAENTRHSDNRLYNELMNVILCRPPNSCLLSLLCVLFLMGCESNQPAPTKKAGE
TLPVLNVETLTVAEQTWPRIVRSQGSLFPDEEATLGIKVEGRVSEVHVDLGDVVEVGDPL
ITIDQEDFKLRVKQAEAQLAAVRSAVGLKPGDPLEKLVPENSPPAREKKAEWDEATANLE
RAKTLYKQNVMGQAEFDQVVSFEQVAQARYASALNGVREKMANITVQQTQLDLAREDLKN
TELKATYPAVVQKRLVAPGSYIRMGDPLLVLVRIDQLRYRGTVPERLSTQLEIGQPIELK
IESVPQRTSKVTRISPFLDQLSRSLLFESLVENPDRELRAGLFAEGRIIVDPDQKAIVVP
ISSVVQFAGTEKVWKAVDGTVKMQEVLLGERRGDQIRILEGLQPGDVILRTAKEGRPGTL
SAAEPQPSAAEQTKAKT
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcgacaatctaccggcatctgggcatcgatccccagcgtgttattctccgcg
atcgcctggatcgcccgatgcctctgctcgataccggggaaccggtttccgagctgtttg
gctaaccgacgtccttctgagagagcgctcatgcaagaatcatcgggcggtataacccgc
ataaccggaccccgattcccggctgaaaatactcgacatagcgataatcgattatataat
gaacttatgaatgtcatcctgtgccgtcctccaaattcctgcctgctcagcctcctgtgc
gtcctgtttttgatgggatgcgaatctaatcaaccagcccccactaaaaaagccggggag
acactaccggtcttgaatgtggagacactgaccgttgccgagcagacctggccacgcatt
gtccgcagccaggggagtctgtttcctgacgaagaggcgacgctggggatcaaggtagaa
ggccgcgtttccgaagtacacgttgatcttggagatgttgttgaggtcggtgatccattg
attacgatcgaccaggaagatttcaaactccgcgtcaagcaggcagaggcacaactggcg
gcagttcgttcggccgtcgggttgaagccgggagacccgcttgaaaaactggtacccgaa
aattcgcccccggcccgtgagaaaaaagccgagtgggatgaggcgaccgcgaacctggaa
cgggcgaagacgctgtataaacagaatgtgatgggccaggccgagttcgatcaggtcgtg
tcgttcgaacaggtggcccaggcccgctatgcctccgctttgaacggggtccgcgagaaa
atggctaatatcaccgtgcaacagacgcaactggatctggcacgggaagacttgaagaac
accgaactgaaagccacatacccggccgtcgtgcagaaacgcctggttgcgcccgggagt
tacattcgcatgggtgatccactgctggtgctcgtgcgaatcgatcagctccgctaccgg
ggaacggtgcccgagcgtctctcgacccagcttgaaattggtcagccgatcgaattgaaa
attgaatcggtaccacagcggacttccaaagtgacccgcatcagtccgttcctggatcag
ttgagccgttcattgctgtttgagtcgctggtcgagaacccggatcgggaattgcgggcc
ggcctgtttgccgaaggacggatcatcgtcgatcccgatcagaaggcgatagtcgtgccg
atctcgtcagtcgtgcagtttgcggggacagaaaaagtctggaaagccgtggatggcacc
gtgaagatgcaggaggtcctgctgggagaacgacgcggtgatcagatccgaattttagaa
ggactgcagccgggtgatgtcattctgcgtaccgcgaaggaaggacgtcccggaacactg
tctgccgcggagccacaaccctcggctgccgaacagaccaaagccaaaacataa
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