Gekko japonicus (Schlegel's Japanese gecko): 107109113
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Entry
107109113 CDS
T04299
Symbol
KDM2A
Name
(RefSeq) lysine demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107109113 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gja03000
]
107109113 (KDM2A)
04121 Ubiquitin system [BR:
gja04121
]
107109113 (KDM2A)
03036 Chromosome and associated proteins [BR:
gja03036
]
107109113 (KDM2A)
Enzymes [BR:
gja01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107109113 (KDM2A)
Transcription factors [BR:
gja03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107109113 (KDM2A)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107109113 (KDM2A)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107109113 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107109113 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
107109113
NCBI-ProteinID:
XP_015265168
LinkDB
All DBs
Position
Un
AA seq
1177 aa
AA seq
DB search
MAAAASIKGQKKARDLEEEEDDSSSDISFSLSSEESEMEPEEERIRYSKRLRGAMRRRYE
DDGISDDEIEGKRTFDLEEKLTTNKFNANFVVFMEGKDFTVEYIQRGGLRDPLIFKNSDG
LGIKMPEPDFSVSDVRLYVGSRRMVDVMDVNTQRDIEMTMAQWARYYETPEEEREKLYNV
ISLEFSHTRLENLVQRPTTVDLIDWVDNMWPRHLKESQTESTNAILDMQYPKVQKYCLMS
VRGCYTDFHVDFGGTSVWYHIHRGGKIFWLIPPTPQNLELYENWLLSGKQGDIFLGDRVS
DCQRIELKQGYTFVIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLRIYSIEDRTRVPNK
FRYPFYYEMCWYVLERYVYCITSHSHLTKDFQKESLSMDMELCSSESGNMDEDDGEAGKD
SRRPVTRRSILTSPVANGANLDYEELGRSCRNLPGLKRTMSMDSESSRGSHNGQAWDSHS
NSPQKGKKIHLTQFELEGLHCLVDKLESLPLHKKCVPTGIEDEDALIADIKLLLEEYASS
DPKLALTGIPIVQWPKRDKLKLQVRPKLRLPTIPITKPHTMKPAPRPATVRPTVSPIVSG
ARRRRVRCRKCKACLQGECGMCHYCRDMKKFGGPGRMKQSCVLRQCLAPRLPHSVTCALC
GEVDKNEDSQDFEKKLMECCICNEIVHPGCLRMDGEGILNDELPNCWECPKCYKGDELEK
AQKRKMDDGDDDTVQAKVLRPLRSCEEPLTPPPHSPTPMLQLIHDPASPRGVVTRSSPGA
GPSDHHVVREKENNPSGKKELSEVEKAKLHGSYLTVTLQRPTKDMHGTSIVPKLQAITAS
STNLRHSPRVVMRQSSARTPQRGGDEEAAEEDDEEESADEEDESAEESGVARLNGQGSRA
FDGEEIWMQKEVWMSVFRYLTRKELCECMRVCKTWYKWCGDRRLWTKIDLSRYKSITPLA
LGGIIRRQPVSLDLSWTNISRKQLTWLIARLPGLKDLILAGCSWSAVSALSTSTCPLLRT
LDLRWAVGIKDPQIRDLLTPPSDKPSQDNRSKLRNMIDFRLAGLDITDATLRLIIRHMPL
LSRLDLSHCNHLTDQSTNLLTAVGSSTRNSLTEINMAGCNKLTDQTLLYLRRISNVTLID
LRGCKQITRKACEHFISDLSINSLYCLSDEKLIQKIS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctgcttctataaaaggacagaagaaagccagagacctggaggaggaagaa
gacgacagcagttccgatatctccttctcactctcgtcggaagagtctgagatggagcct
gaagaagagcggatccgttatagcaaaagactgcgtggtgctatgagacgtcgttatgag
gatgatggcatctcagatgatgagattgagggcaaacgaacatttgatcttgaagagaaa
cttaccacaaacaaatttaatgccaactttgttgtctttatggaaggcaaagatttcact
gtggaatatattcagcgtggtggtttaagagaccctttgatcttcaagaattctgatgga
cttggaattaaaatgccagagccagacttcagtgtgagtgatgtacgactatatgtaggg
agtcggaggatggtggatgtcatggatgtgaatacacagagagacattgagatgacaatg
gctcagtgggcacgctattatgaaactccagaggaggagcgggagaagctgtataatgtt
atcagcctggagttcagtcatacccggcttgagaacctggtacagagaccaacaacggtg
gatttgattgattgggttgacaacatgtggccaaggcatcttaaagaaagccagacagaa
tcaacgaatgccattctggatatgcagtatcccaaagtgcagaaatactgtctgatgagt
gtcaggggctgctatactgacttccatgtggactttggtggcacttctgtatggtatcat
attcacagagggggaaagatcttctggttaatccctcccactcctcagaacttggagtta
tatgaaaactggctgctctcagggaaacaaggggacatttttcttggtgaccgggtgtca
gattgtcagcgtattgagctcaagcaaggctatacctttgtcataccctcaggttggatc
catgcagtgtacactcctatggacacccttgtttttggtggtaactttctgcatagtttc
aatatccctatgcagttgaggatctacagcattgaagaccgaacacgggtcccaaataag
tttcgctatcccttttattatgaaatgtgctggtatgtactagaacgctatgtctactgc
atcaccagccattctcacctgactaaggactttcagaaggaatcgctcagcatggatatg
gagctatgtagctcagagtctggaaacatggatgaagatgatggagaagcaggaaaggac
tcaaggcgtccagtcaccagacggtcaatactcactagccctgtggctaatggtgctaac
ctagactatgaggagctaggtagaagctgccggaatttgccaggtctaaagagaactatg
tccatggactctgagtccagccgaggctctcacaatggccaggcctgggactctcacagc
aacagccctcaaaagggcaagaagatacatctgacacaatttgaacttgagggtctgcac
tgtcttgtagacaagctggaatctttgcctctgcacaagaagtgtgtacctactggcatt
gaggatgaggatgccctgattgctgacatcaagctgttgctggaggaatacgcaagcagt
gaccccaagctggcacttactggcatccctattgtccagtggccaaagagggataagctc
aaacttcaggttcggccaaagttaagattacctaccatccccatcaccaagccccacacc
atgaaaccagcgccacggcctgcgactgtgaggcccacagtctctcctatagtgtctggt
gctcgcagaaggcgggtgcgatgtcgtaaatgcaaggcctgcctgcagggtgaatgtggc
atgtgccactactgcagggatatgaagaagtttggtgggcctggtcgtatgaagcagtcc
tgtgtattgcgacagtgcttggcgccccgactgcctcactctgtcacatgtgcactttgt
ggggaggtagataagaatgaggattcacaggactttgagaagaagttaatggaatgctgc
atctgcaatgaaattgttcaccctggctgtctacggatggatggggaagggatattgaat
gatgaattgcccaactgctgggagtgtccaaagtgctacaagggagatgagttggagaaa
gcccagaagcgaaaaatggatgatggtgatgatgacacagtccaagccaaagtcctacgc
cccctgcgaagctgtgaggagcctctgactccaccaccacactcacccaccccaatgctg
cagttgatccatgaccctgcatcaccgcgtggcgtggtgacacgatcctctccaggagca
gggcctagtgatcatcatgtggtgcgggaaaaggaaaataaccctagtggcaagaaagag
ctttcagaggtagaaaaggccaagctccatggctcatatcttacagtcacgttacaaaga
cctaccaaagacatgcatggcacttccattgtgcccaaactgcaggcgatcactgcctcc
tccaccaatctgcggcactcaccccgtgttgtcatgcgccaaagttcagccagaacaccc
cagcggggtggagatgaagaggcagctgaggaagatgatgaggaagaaagtgcagatgaa
gaagatgagagtgctgaggagagtggggtagctagactgaatggtcaaggtagcagggca
tttgacggcgaggagatctggatgcagaaggaagtgtggatgtctgtcttccgctatctc
actcggaaagagctctgtgaatgtatgcgtgtatgcaaaacctggtacaaatggtgtggt
gacagaagattgtggacaaagattgatttgagcaggtacaagtccatcacacccttggct
ctagggggtatcatcaggaggcagccagtcagccttgacctcagctggaccaatatttcc
agaaaacagctcacctggctcattgccaggctaccaggcctcaaagacctcatcttagca
ggctgctcctggtcagcagtctctgctcttagtacctccacctgcccccttctcaggact
ctcgatcttcggtgggcagtaggaatcaaggatccacagattcgggacttgctcacacct
ccatcagataaaccaagtcaagacaatcgcagcaaactccgtaatatgatagacttccgg
ttggctgggctggacattactgatgccacactccggcttatcatccgtcacatgcctctc
ctatcacgacttgatcttagtcactgcaatcaccttacagaccagtcaacaaacctgtta
acagctgtggggtcttccacacgaaactcactcactgaaatcaacatggcaggctgcaat
aagctcacggaccagaccctgctgtatctgcggcgcatctcaaatgtcaccctgatagac
ctgcgaggctgcaagcagatcacccgcaaggcctgcgagcacttcatctcagacctgtca
atcaacagcctctactgcctgtctgatgaaaagctgatccagaaaatcagctag
DBGET
integrated database retrieval system
