Gekko japonicus (Schlegel's Japanese gecko): 107116985
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Entry
107116985 CDS
T04299
Symbol
TRAF6
Name
(RefSeq) TNF receptor associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04010
MAPK signaling pathway
gja04120
Ubiquitin mediated proteolysis
gja04140
Autophagy - animal
gja04144
Endocytosis
gja04620
Toll-like receptor signaling pathway
gja04621
NOD-like receptor signaling pathway
gja04622
RIG-I-like receptor signaling pathway
gja05132
Salmonella infection
gja05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107116985 (TRAF6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107116985 (TRAF6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107116985 (TRAF6)
04140 Autophagy - animal
107116985 (TRAF6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107116985 (TRAF6)
04621 NOD-like receptor signaling pathway
107116985 (TRAF6)
04622 RIG-I-like receptor signaling pathway
107116985 (TRAF6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107116985 (TRAF6)
09171 Infectious disease: bacterial
05132 Salmonella infection
107116985 (TRAF6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gja04131
]
107116985 (TRAF6)
04121 Ubiquitin system [BR:
gja04121
]
107116985 (TRAF6)
Enzymes [BR:
gja01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107116985 (TRAF6)
Membrane trafficking [BR:
gja04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
107116985 (TRAF6)
Ubiquitin system [BR:
gja04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
107116985 (TRAF6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
Med21
SlyX
DUF4455
Spc29
DUF1664
DUF16
PUMA_CC
HMMR_N
DUF7310
HAP1_N
UPF0242
Baculo_PEP_C
TMF_DNA_bd
PspA_IM30
Motif
Other DBs
NCBI-GeneID:
107116985
NCBI-ProteinID:
XP_015274505
LinkDB
All DBs
Position
Un
AA seq
293 aa
AA seq
DB search
MQRNELARHMQEFTQVHMRMMAQSLRSIIATTPSPMSFLGGLPFDPSLFSQAVPTQCECS
PEVQNFKETVQQLEGRLVRQDHQIRELIAKMETQNTHMGNLKRTIRNLEEKITEIEAQQC
NGIFIWKIENFSIYLKAQEEERPVVIHSPGFYTGKPGYKLCLRLHIQLPNAQRCANYISL
FVHTMQGEHDSHLPWPFQGTIRLSILDQSEGSPRHNHEEVMDTKPELLAFQRPTVPRNPK
GFGYVTFMHLQALKQRTYVKDDILLVRCEVVTRLDLTSLRREGFQPRSTDGTV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaggaatgagttggcacgccatatgcaagaattcactcaggttcatatgagaatg
atggctcagagtctccggagcatcattgctactaccccatctcccatgtctttccttgga
ggattaccttttgacccatcacttttctctcaagccgtgccaacccaatgtgaatgtagc
cccgaagtccagaacttcaaggagaccgttcagcaattggaaggtcgcttggtaagacaa
gatcaccaaattcgggaactgattgctaagatggagacacagaacacacacatggggaat
ctcaagcgcaccattcgaaatttggaagaaaaaattaccgaaatcgaagcacaacagtgt
aatggtattttcatctggaagattgagaacttcagtatatatctaaaagcacaagaagaa
gagaggcccgttgttatccacagtccaggcttctacacagggaaacctggctataagctt
tgtttgcggctgcatatccagttgccgaatgctcagcgctgcgctaactatatttccctt
tttgttcacactatgcaaggagaacatgacagccatctgccttggccattccaaggcacc
atacgactttccattctggatcagtcagaaggttctccaagacacaaccatgaagaagtg
atggataccaagcctgagctcttagccttccagcggccaacagtccctcgcaacccaaag
ggctttgggtatgtgactttcatgcatttgcaggcactaaaacaaagaacctatgtgaaa
gacgatattctgttggtacgctgtgaggtcgtgacgcgcttagacttaaccagtctccga
agagagggttttcagcctcgtagtactgatgggactgtgtag
DBGET
integrated database retrieval system
