Gekko japonicus (Schlegel's Japanese gecko): 107122120
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Entry
107122120 CDS
T04299
Symbol
EFTUD2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107122120 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107122120 (EFTUD2)
Spliceosome [BR:
gja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107122120 (EFTUD2)
Complex C
U5 SnRNP specific factors
107122120 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
107122120
NCBI-ProteinID:
XP_015280638
UniProt:
A0ABM1L3V1
LinkDB
All DBs
Position
Un
AA seq
975 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDEMGRDSKDLDELDDDDDDDEMGDHDDDHPGMDVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCMIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLIRCLGLEELPPG
GEVGGDEAEHAGKFGSPALCSVHSAAARAQEGMERDINYQEFAKRLWGDIYFSPKTRKFT
KKAPTSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLR
LVCKKFFGEFTGFVDMCVQHIPSPKAGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCH
TTKMYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARY
HIEVNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNP
SELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVAD
PVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEF
FQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLGSVKDSIVQGFQWGTREG
PLCDELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQ
APADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFS
LSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPM
LLELAKQDVVLNYPM
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atggatacagacctttatgatgagtttgggaattacataggtcctgaacttgattctgat
gacgacgatgatgagatgggccgggattcaaaggatctcgacgagcttgatgatgacgac
gatgacgatgagatgggggaccatgatgatgaccatcctgggatggatgtggtcttgcat
gaggataagaaatactatccaaccgctgaggaggtctatgggccagaggtggagaccata
gtgcaggaggaagacacacagcccctgactgagcctattattaagccagtgaagaccaag
aaattctcccttatggagcagacattgccagtcacagtatatgagatggacttcctagcc
gacttgatggacaactcggaactgatccggaacgtcacgctttgcggccacttgcaccat
ggcaagacttgctttgtcgattgcatgattgagcagactcatcctgagattaggaagcga
tacgaccaggatctttgctatacagatatcctgttcactgaacaagagaggggagttggg
atcaagagcactccagtgaccattgttcttccagacaccaaaggcaaatcgtttctcttc
aacgtcatggacacaccaggtcacgtaaacttctctgatgaagtcacagccggtcttcgc
atttctgacggagtggtgctttttatcgatgctgccgagggggtcatgctcaacacggag
cggttgatcaagcatgccgtgcaggagaggctggccgtgaccgtgtgtataaacaagatc
gatcggctgatcctggaactgaagttgccccctacggatgcctactacaagctacggcat
atcgtggacgaagtcaatggcttgatcagatgcctgggcttggaggagcttccgccagga
ggagaagtgggcggagacgaggctgagcacgctgggaagttcggcagccccgccctctgc
tctgtgcactcagcagcagctcgtgcccaggaggggatggagagagacatcaattaccag
gaatttgcgaagaggctttggggagacatctacttcagcccaaagacgaggaagttcacg
aagaaggccccaaccagcagttcccagcgcagctttgtggaattcattctggagcctctt
tacaagatcttggctcaggtggttggggatgtggacaccacccttcccaggactctggac
gaactggggatccacctgaccaaggaggagctcaagctcaacatccgccccctcctgagg
ctcgtctgcaagaagttttttggcgagttcacagggtttgtggatatgtgtgtgcagcac
atcccctccccaaaagcaggcgccaagaccaaaatcgaacacacctacaccggaggagtg
gactccgacctgggggaggccatgagcgagtgtgatcctgatggcccgctcatgtgccac
accacaaagatgtacagcacagacgacggggtccagttccatgcatttggcagggtgctg
agtgggaccatccatgccgggcagcccgtcaaagttcttggagagaactacaccctggaa
gatgaagaggattcacagatctgcaccgtgggacgcctgtggatctccgtggcaaggtac
cacatagaggttaacagagtcccggctggcaactgggtgctcattgagggggtagatcaa
cctattgtgaagacagccaccatcaccgaacccaggggcaacgaagaggctcagatcttt
cgtcccttgaagttcaacaccacgtctgtcatcaagatagccgtggagcctgtcaatccg
tctgagctccccaagatgctggacggcctgcggaaagtcaacaagagctacccgtctctc
accaccaaggtagaagaatccggggaacacgtgatcctgggcacaggcgagctctatctt
gactgtgtgatgcacgacctgcggaaaatgtactccgagattgacatcaaggttgctgat
cccgtggtaacgttctgtgagaccgttgtggaaacctcttccctgaagtgttttgctgag
acacccaataagaagaacaagatcaccatgattgccgagccgctggagaagggcctggcg
gaagacattgagaacgaagtggtgcagatcacatggaacaggaaaaagctgggtgagttt
ttccagaccaagtacgactgggatttgctggctgcccgttccatctgggccttcgggcca
gatgctaccgggcccaacatcctggtggacgacaccctgccctccgaggttgacaagacc
ctcttgggctccgtgaaggacagcatcgtgcagggcttccagtgggggaccagagaaggg
cctctctgcgatgagttgatccgcaacgtcaagttcaagatcctggatgcggtgatcgcc
caggagccactgcatcggggaggggggcagatcatcccgacggccaggagggtggtgtat
tccgccttcctcatggccacgccacggttgatggagccctattactttgtggaggtccag
gccccggctgactgtgtgtctgcagtgtataccgtcctagcccggcggagagggcacgtc
acccaggatgcgcccatccccggctcccctttgtacaccatcaaagccttcatcccggcc
atcgactcgtttgggtttgagacagacctcaggacacacacccaggggcaagcgttctct
ctctcagtcttccaccactggcagatcgtgccgggcgatcctttggacaagagcatcgtg
atccgaccgctggagccccagcccgcccctcacctggccagagagttcatgatcaagacc
aggcgcaggaagggcctgagcgaagacgtgagcatcagcaagttcttcgacgaccccatg
ttgctggagctggccaagcaggacgtggttctgaactaccccatgtga
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integrated database retrieval system
