Gilvimarinus japonicus: R50076_07350
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Entry
R50076_07350 CDS
T10758
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00300
Lysine biosynthesis
gjp00550
Peptidoglycan biosynthesis
gjp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
R50076_07350
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
R50076_07350
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gjp01011
]
R50076_07350
Enzymes [BR:
gjp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
R50076_07350
Peptidoglycan biosynthesis and degradation proteins [BR:
gjp01011
]
Precursor biosynthesis
Amino acid ligase
R50076_07350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
EACC1
Methyltransf_28
Arg_repressor_C
Motif
Other DBs
NCBI-ProteinID:
BFM19686
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Position
870105..871634
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AA seq
509 aa
AA seq
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MAARMNERAMTLAQVLDDESLHELDSVRWSVLQADSRRIMPGHVFVALQGATVDGRDYIS
DAIHRGASAVVMEAEAKAPAVEYRGSVPLISVVGLSAKMSAIAARAYADPSAELNIIGVT
GTNGKTTCSLLIAQLLEALGQRAAVVGTLGYGRVGEPLQATGFTTPDAISSQALLRDLAE
QRIGSVVMEVSSHALAQGRVKAVRMSTAVFTNLSHDHLDFHGDLKAYGKAKARLLKARDL
QCAIINRDDSWCKSLLKKAETLEQVFSYSLSSKKADVYFEALTYCADGITGTVHTSKGSA
EITSSLIGDFNASNILATIAVAISQGYALDKIAAVVPRLQSAPGRMEQVRLRADQGVQVV
VDYAHTPDALEKTLRALRRHTEGSLWCVFGCGGDRDREKRPAMGRVAEKSADYTIVTNDN
PRGEDPASIAGEIVRGMHHPERCLVIAERDKAIDLAVQQARAGDTVLLAGKGHEAVQIFA
QRQLPFSDVQQARAALVKRLEKDAQGGQA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgcatgaatgagcgcgctatgaccctggcccaggtgctggacgatgaatcc
ttgcacgagttggattcagtgcgttggtccgtgttgcaggctgatagtcgtcgcattatg
ccgggccatgtttttgtcgcgctgcagggcgcgacggtggacgggcgcgactatatcagt
gatgcgattcaccgtggcgccagtgctgtggtcatggaggccgaagcgaaagcgccggcg
gtggaatatcgtggttcggtgccgttaatctcggtggtggggctaagcgcaaaaatgagt
gctatcgccgctcgtgcttacgctgaccccagcgcggagctaaacattattggcgtgact
ggcacgaacggtaaaaccacgtgcagtttgttaattgcccagttgcttgaagcgcttggg
cagcgtgcggcggtagttggcacgctcggttacggccgggtaggcgagccactgcaggcg
accggctttacaacgcccgacgctatctccagccaggcgttgttgcgtgatttagctgag
cagcgtattggctcagtggtgatggaagtgtcttcccatgcgctggcgcaaggtcgtgtt
aaagccgtgcgcatgtcgacggcggtattcaccaatttatcccacgatcatttagatttt
cacggtgatttaaaagcgtacggcaaagctaaggcgcgtttgttaaaagcgcgtgatttg
cagtgcgcgattatcaatcgcgatgacagttggtgtaagtcactactgaaaaaagccgaa
acgctggagcaggtgttcagttattcccttagctcaaaaaaagctgatgtttatttcgag
gcgttaacctattgtgccgatggtatcaccggtacggtgcacacgtcgaagggaagtgct
gagattacctcatcactgattggcgattttaatgccagtaatattttagccacgatcgcg
gtggcgatatcacagggttacgcgttggataaaatcgcagcggtcgtccctaggttgcaa
tccgccccagggcgaatggaacaggttcgtttgcgcgccgatcaaggggttcaggtggta
gtggattatgctcacacgcccgacgcgctagaaaaaaccttacgagcactgcgacgccac
accgaaggcagcctttggtgtgtgtttggttgtggcggtgatcgcgaccgtgaaaaacgt
ccggctatggggcgagtggctgaaaagtcagcggactacaccatagtgaccaacgataat
ccgcgcggtgaagacccggctagtattgccggtgaaatcgtccgtggcatgcatcacccc
gagcgctgtctagtaattgccgagcgcgataaagcgattgatctagcagtgcagcaagca
cgtgccggtgacaccgttttgctggctggcaaggggcatgaggcggtgcaaatttttgcg
caacgtcagctgccgtttagtgatgtgcagcaagcgcgtgccgccctcgtgaagcgcctt
gaaaaagacgctcaaggggggcaggcatga
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