Gilvimarinus japonicus: R50076_09210
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Entry
R50076_09210 CDS
T10758
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gjp Gilvimarinus japonicus
Pathway
gjp01501
beta-Lactam resistance
gjp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50076_09210
01503 Cationic antimicrobial peptide (CAMP) resistance
R50076_09210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gjp03036
]
R50076_09210
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gjp02000
]
R50076_09210
01504 Antimicrobial resistance genes [BR:
gjp01504
]
R50076_09210
Chromosome and associated proteins [BR:
gjp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
R50076_09210
Transporters [BR:
gjp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
R50076_09210
Antimicrobial resistance genes [BR:
gjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50076_09210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND_2
BSH_RND
BSH_CzcB
YknX_C
Beta-barrel_RND
BSH_CusB
BSH_YknX
HH_EMRA
HH_MFP_RND
RND-MFP_C
Biotin_lipoyl
BSH_Fcp1
BSH_LcnD
Motif
Other DBs
NCBI-ProteinID:
BFM19872
LinkDB
All DBs
Position
1082797..1083936
Genome browser
AA seq
379 aa
AA seq
DB search
MPNKPSTRLPVCMRGKLLLAFASLWFLAGCTDEATLKPGAGGSKARPVIAAKVALSAEQV
NVEAVGTSRALQSVAVRPRVAGQVTEVGIEPGQKVTEGQVLLRLDARDEALALRNAEVEL
ADAERLLTRYRQTKDSGAVTESALDDAESAVARAQIAVDRARVDLEYQKVVAPFAGYVGL
SDIDPGAWVDNSTVITTIDDRSVLLVTFALPELLLGQIQPGQSIELATWRENSVTAQGQV
VSIDSRVDENERTFKVRAHVDNSADLLRPGMSFRIALSLTGNTYVLVPEVSLQWGARGSF
VWAIENGVAKRKLATIVQRRAGEVLVNSELQDGALVVLEGIQMVREGQPVKVAEVRELNS
QSSNTAASDAAENKEVSGE
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaataaaccgtcgacccgtttacctgtgtgtatgcgtggcaaactattactcgct
tttgcctcactgtggtttttggccggttgcactgacgaggccacccttaagcccggcgct
ggtggttctaaagcgcgaccagtgattgctgccaaggtcgcgttaagtgccgagcaagtg
aatgttgaggccgtgggtacgtcccgtgcgctgcagtcggttgccgtgcgtccccgcgtg
gcggggcaggtgaccgaggtgggtatcgagcccggacaaaaagttaccgaagggcaggtg
ttgttgcgcttggatgcccgcgatgaagcgctggcgctgcgcaacgccgaggtcgaactg
gccgatgccgagcgcttgttaacccgttaccgtcaaaccaaagacagcggcgcggtaaca
gagtcggcgctcgacgacgccgaaagtgcggtggcgcgcgcacaaattgccgttgatcgc
gcccgtgtcgacttggaataccaaaaggtggtggccccatttgccggttacgttggttta
agtgatattgatccgggcgcctgggttgataacagcactgtgatcaccaccattgatgat
cgcagtgtattgttggtgacctttgctttgccggagttgttgttgggtcagatccagccg
ggccaaagcattgagcttgcgacctggcgcgaaaactcggtaacggcgcaggggcaggtg
gtctcaatcgacagtcgggtcgatgagaatgagcggacctttaaggtgcgagctcatgtg
gataacagtgcagatttactgcgccccgggatgagctttcgtatcgctttatcgctgacc
ggtaatacttatgttctggtgcccgaggtgtccttgcagtggggagcgcgtggctcgttt
gtctgggccattgagaatggcgtggctaagcgaaaactagcgaccatcgttcagcgccgc
gcgggtgaagttttggtgaacagcgagttgcaagatggtgcgttggttgtgctggaaggc
attcaaatggttcgtgaaggtcaaccggttaaggttgccgaagtgcgcgagttaaacagt
cagtcctctaataccgcagcctcagatgccgccgagaataaagaggtgagcggtgagtga
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