Gilvimarinus japonicus: R50076_26170
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Entry
R50076_26170 CDS
T10758
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
gjp Gilvimarinus japonicus
Pathway
gjp01501
beta-Lactam resistance
gjp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50076_26170
01503 Cationic antimicrobial peptide (CAMP) resistance
R50076_26170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gjp02000
]
R50076_26170
01504 Antimicrobial resistance genes [BR:
gjp01504
]
R50076_26170
Transporters [BR:
gjp02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
R50076_26170
Antimicrobial resistance genes [BR:
gjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50076_26170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
BFM21568
LinkDB
All DBs
Position
complement(3093863..3096991)
Genome browser
AA seq
1042 aa
AA seq
DB search
MARFFIDRPVFAWVISIIIMLAGVLAIETLPISQYPEVAPPSVEIRTSYPGASAKVVEDS
VVQIIEQNLTGIDNVQYLASTSDSSGTGQVTVTFDAGTDPDIAQVQVQNKLQGAMPLLPQ
EVQQQGIRVTKSSAGFLMVLGFVSTDNSLDKYDLADFVAANVSEPLSRVNGVGSIQIFGS
QYAMRIWLNADKLANYKMTTGDVVSAIRAQNVQIAAGELGGAPAVPGQDVNASIVVQTRL
ETPEEFRRILLRVNEDGSQVRLADVARVELGGENYQFETEYNGQSATGLAITLASGANAL
DTAANVRERIAELKPYFPANTEVVYPYDTTPFVKLSIEGVVHTLIEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILEAFGFSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
HEDKLPPREATRKSMGQITGALVGIALVLSAVFVPMAFFGGSTGVIYRQFSITVVSAMTL
SVIVALTLTPALCATLLKPVDPDHHQKRGFFGWFNRTFDRSANRYQSSVGYILARTGRFM
AIYIAIALVLVLLFGRLPGSFLPDEDQGLMFTQMTLPVGSTKERSIAVMNDVENYYLSQD
DTVESVFSVIGFSFSGRGQNNGIAFVRMKDWSERTGDGQDVHSVAGAAMGYFSTIKEAMV
FAFVPPAITQLGTSTGFNLQLKDLGGVGHEALMEARNQLLGMASQESTLVGVRPNGQNDT
PQFKLDIDMEKASALGVSIDEINSVFSTAWAASYVNDFIDQSRIKRVYVQGDAEFRMMPD
DVGNWYVRNANGEMVPFSAFSTGRWVYGSPRLERYNGVSAVNIQGQGAPGVSSGDAMNLM
ESLVAKLPPGIGFEWTGMSLQERESGDQAPMLYALSILVVFLCLAALYESWSVPISVLMV
IPLGVLGAVLFAMGRGLSNDVYFQVGLLTTVGLSAKNAILIVEFAKSLYEDGMDLVAATV
EAVRMRLRPIIMTSLAFGLGVTPLFIASGAGSGAQNAIGTAVLGGIVFATFLAIFFVPLF
FVVVFKLAHRITGKKSKVIAES
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcaagattctttattgatcgtcccgtttttgcgtgggtgatctcgattattattatg
ttggccggtgtgttggccatcgagacactgcctatatcgcagtaccccgaagttgcaccg
ccatcggtagagattcgcacctcttaccctggtgcatcggccaaggtggtcgaggactcg
gtggtgcaaatcatcgagcaaaaccttaccggtatcgacaatgtgcagtacttggcctca
accagtgattcatcgggtactggtcaggtaaccgttacgtttgatgccggtactgacccc
gatattgctcaggtacaggtacagaacaagctccagggtgcaatgccgctgttgccgcaa
gaggtacaacaacaagggattcgggtgacaaaatcctcggccggcttccttatggttctg
ggttttgtgtcgaccgataacagcttggataaatatgacctggccgactttgtcgccgct
aatgtgagtgagcccctaagccgggtcaacggcgtgggcagtattcagatttttggctcg
cagtacgctatgcgtatctggcttaacgccgacaaactggccaattataaaatgaccacc
ggtgacgtggtgtcggctattcgtgcacagaacgtgcaaattgccgccggtgagttgggc
ggtgcgcccgccgtgccggggcaggatgtcaacgccagcatagtggtacaaactcgctta
gaaacaccggaagagtttcgccgtattttactgcgcgttaatgaagatggctcgcaggta
cggctggctgatgtcgcccgcgttgagctaggcggtgaaaactaccagtttgaaacggaa
tacaacggtcagtcggctaccggtttggcgattactctcgcctcgggtgccaatgcgcta
gacactgccgccaacgtgcgtgagcgtattgccgagttaaaaccttatttcccggccaac
actgaagtggtttacccctacgatacaacgccgtttgttaagctctccattgaaggggtg
gtacatacgctgattgaggcgatcgtactggtattcttggtgatgtatctgttcctacag
aatttccgcgccaccttgattcctaccattgcggtgccggtggtgttgctgggcaccttt
gccatcttagaggcgtttggttttagcattaacacgctcaccatgtttggcatggtactg
gccatcggcttgttggtggacgatgccattgtggtggtcgagaacgtcgagcgggtgatg
cacgaagataagctcccgccacgcgaggcgacgcgaaaatccatgggtcaaattaccggc
gccttggtgggtatcgccttggtgctgtcagcggtgtttgtgccaatggcgttttttggt
ggctccaccggtgttatttatcgccagttctctattaccgtagtatcggccatgacgctg
tcggtgatcgttgccttgacgctgacaccggcgctgtgtgccaccttgttaaaaccagtc
gatccagatcatcaccaaaaacgcggtttttttggttggtttaaccgtacctttgaccgc
tcggccaatcgctaccagagtagcgtcggttatattttggcgcgtaccggtcgctttatg
gccatctatattgcgatcgccttagtgttggtactgttgtttggccgtttacctggttcg
ttcttgcccgatgaagaccaaggcttgatgtttacccagatgacgttgccggtgggctcg
accaaagagcgctcaatagccgttatgaacgatgtcgagaattactacctcagtcaagat
gacacggttgagtccgttttctcggtgattggctttagctttagcggtcgtggtcaaaac
aacggtattgcttttgtcagaatgaaagattggtctgagcgcaccggagatggtcaggat
gtccattcggttgccggtgctgctatggggtatttctcgaccattaaagaggccatggtg
tttgcttttgtccctccagccattactcagctgggcacctcaaccggctttaacttacag
ctaaaagatttgggtggcgtgggtcacgaggcgttgatggaggctcgcaaccagttgttg
ggcatggcctcacaagagagcaccttggtgggtgtgcgccccaatggtcaaaacgacacg
ccgcagtttaaactcgatattgatatggaaaaagcctcggcactcggggtatcgatcgac
gaaatcaacagcgtgttttcgaccgcgtgggcggcgtcttacgtcaatgactttattgat
caaagccgtatcaagcgagtctatgtccagggtgatgccgagtttcggatgatgccggac
gacgttggcaactggtatgtgcgcaatgccaatggtgaaatggtgcctttctcggccttc
tcgaccggccgctgggtgtatggctcccctaggcttgagcgctataacggcgtttcggcg
gtgaacattcaaggccagggcgcgccgggcgttagctcgggtgatgccatgaacttgatg
gaatcgctcgtggcaaagctgccgccgggtattggttttgagtggaccggtatgtcgctg
caagaacgtgaatccggggatcaggcgccgatgttgtacgcgctgtcgattctggtggtg
ttcttgtgtcttgccgccttgtacgaaagctggtcggtacctatctcggtgcttatggtg
attcctctgggcgttctcggcgctgtgttgtttgctatgggccgcggcttgtctaacgac
gtttactttcaggtggggctgttaacgaccgtaggtttgtcggccaaaaacgcgatcttg
attgtggaatttgccaaatcactgtacgaagatggtatggatttagtggcagccacggtt
gaggcggtgcgtatgcgtttgcgccccatcattatgacgtctctggccttcggccttggg
gttacgccgttgtttatcgcctcgggggcgggctcaggcgcgcaaaatgctattggtacc
gcggtactcggtggtattgtattcgccaccttcctggcgatcttctttgtgcctctgttt
tttgttgtggtgtttaaattggcccaccgtatcaccggcaaaaaatctaaggtgatcgcc
gagtcgtaa
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