Gilvimarinus japonicus: R50076_26180
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Entry
R50076_26180 CDS
T10758
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
gjp Gilvimarinus japonicus
Pathway
gjp01501
beta-Lactam resistance
gjp01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
R50076_26180
01503 Cationic antimicrobial peptide (CAMP) resistance
R50076_26180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gjp03036
]
R50076_26180
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gjp02000
]
R50076_26180
01504 Antimicrobial resistance genes [BR:
gjp01504
]
R50076_26180
Chromosome and associated proteins [BR:
gjp03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
R50076_26180
Transporters [BR:
gjp02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
R50076_26180
Antimicrobial resistance genes [BR:
gjp01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
R50076_26180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
HH_MFP_RND
HH_AAEA_pHBA
YknX_C
BSH_CusB
Beta-barrel_RND_2
BSH_CzcB
HH_EMRA
HH_YBHG
HH_CzcB
DUF1344
MalQ_N
Motif
Other DBs
NCBI-ProteinID:
BFM21569
LinkDB
All DBs
Position
complement(3096997..3098157)
Genome browser
AA seq
386 aa
AA seq
DB search
MSSSLPKFFPLWITLLAVVSLAACESKEPKGAAGAGAPPPTEVTVVTLKEQTVELSNTLP
GRAVAFRKAEVRPQVTGILQKRLFTEGAIVEEGQQLYQIDAARYEAALANAKAGLARAKA
NLTTTQAREKRYKDLLGEKAVSQQEYDDALSQFEQAKADVAVSEAAVQTADIDLRYTKVM
APISGRIGKSAITEGALVSAGQSAVLTTIHQLDPIYVDVSESAARVLAMRRQLMSGRVSQ
AQQPKVTLNLEDGSQYGHEGELRFSDMSVNETTGTVVLRALFDNPDSLILPGMFVRATVD
EGKRDNTVLVPQRGVTRDREGNATALVVDAENKVEMRQIQASRAVGSDWLVEEGLAAGDR
VIVTGLQKVRPGAPVKAVEAGSAEGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcattgcctaaatttttcccgctgtggataaccttactagcggtggttagc
ttggctgcctgtgagtctaaggagccaaaaggtgcagctggtgctggtgcaccgccgcca
accgaggtgaccgtcgttacgcttaaggagcaaacggtcgagctaagcaacacattgcct
ggtcgcgctgttgcgtttcgcaaggccgaggtacggccacaggtgacgggcattttgcaa
aaacggttgtttaccgaaggggctattgttgaagaagggcagcaactgtatcaaattgat
gcggcacgctatgaggcggctttagcgaatgccaaagcaggcttggcgcgcgcaaaagcc
aacctgacaaccacccaggcccgtgaaaagcgctacaaggatttgctcggcgaaaaggcc
gtcagtcagcaagaatatgacgatgcgttgtcgcaatttgagcaggctaaggcagatgtt
gctgtgagtgaggcggcagtgcagacggcggatatcgatttgcgttacaccaaagtaatg
gcgcctattagtggacggatcggtaagtcggcgattaccgagggtgcgctggtatcggcc
ggacaaagtgccgtgctgacgactattcaccaattggatccgatttatgtcgatgtctcg
gagtcggcggctcgggtactggccatgcgccggcagttgatgagtggtcgggtatcgcag
gcgcaacaacctaaagtgaccttgaaccttgaagatggcagccagtatggccacgagggt
gagttgcgcttttcggatatgagcgttaacgaaactaccggtaccgtggtgttacgcgcc
ttgtttgacaaccccgactcgctgattttgcccggtatgtttgtgcgcgccaccgttgat
gaaggtaaacgcgacaacacagtgctggtgccccagcgcggcgttacacgtgatcgcgaa
ggcaatgctaccgctttggtcgtcgatgctgagaacaaagtcgagatgcgtcaaattcag
gcgagccgcgcggtaggcagtgactggctggtggaggaaggtcttgctgcaggcgatcgt
gtgattgttaccggtctgcaaaaagttcgccccggtgcgccggttaaagccgttgaagcg
ggaagcgctgagggagagtaa
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