Gallaecimonas kandeliae: PVT67_11885
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Entry
PVT67_11885 CDS
T09225
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
gkn
Gallaecimonas kandeliae
Pathway
gkn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gkn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PVT67_11885 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gkn03400
]
PVT67_11885 (nth)
Enzymes [BR:
gkn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
PVT67_11885 (nth)
DNA repair and recombination proteins [BR:
gkn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PVT67_11885 (nth)
Prokaryotic type
PVT67_11885 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
WKE64374
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All DBs
Position
2386959..2387594
Genome browser
AA seq
211 aa
AA seq
DB search
MNQQKRLEILTRLRDANPHPTTELHFSTPFELLVAVTLSAQATDVGVNKATARLFPVANS
PKAIWELGVEGLKDYIKTIGLFNSKAENVHKMCGILLEQHGGEVPQSREALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVSNRTKFAPGKDVKAVEEKLEKVVPKEFKVDVHHWLI
LHGRYTCIARKPRCGSCIIEDLCEYKDKTEI
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcaaaaacgcctcgagatactgacgcgcctgcgggacgccaatccccacccc
accactgagctgcatttcagcacgcccttcgagctgctggtggcggtgaccctctcggcc
caggccacggacgtgggggtcaacaaggccacagcccggctgttccccgtggccaattcc
cccaaggccatctgggagctgggcgtcgagggcctcaaggactacatcaagaccataggc
ctcttcaattccaaggccgagaacgtccacaaaatgtgcggcatactgctggaacagcac
ggcggcgaggtgccacaaagccgtgaggccctcgaggccctgcctggcgtcggccgcaag
accgccaacgtggtgctcaacaccgccttcggctggcccaccatagcggtggacacccat
atcttccgggtctccaaccgcaccaaattcgcccccggcaaggacgtcaaggccgtggag
gagaagctggagaaggtggtgcccaaggaattcaaggtggacgtgcaccactggcttatc
ctgcacggccgctacacctgcatagcccgcaagccccgctgcggctcctgcatcatcgaa
gacttgtgcgagtacaaggacaagacggaaatctga
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