Giardia lamblia: GL50803_0022112
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Entry
GL50803_0022112 CDS
T01047
Name
(RefSeq) putative U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
gla
Giardia lamblia
Pathway
gla03018
RNA degradation
gla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GL50803_0022112
09123 Folding, sorting and degradation
03018 RNA degradation
GL50803_0022112
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gla03019
]
GL50803_0022112
03041 Spliceosome [BR:
gla03041
]
GL50803_0022112
Messenger RNA biogenesis [BR:
gla03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
GL50803_0022112
mRNA degradation factors
5'-3' decay
Lsm complex
GL50803_0022112
Spliceosome [BR:
gla03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
GL50803_0022112
Complex C
U2 snRNP components
GL50803_0022112
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EDC3_N
Motif
Other DBs
NCBI-GeneID:
5702582
NCBI-ProteinID:
XP_001709658
UniProt:
A8B4P7
LinkDB
All DBs
Position
4:complement(<837003..>837383)
Genome browser
AA seq
126 aa
AA seq
DB search
MSGASLTYLQSEGAGRKTGMDVDHSNEEYMEAPLFHGSAGDRVTPEYTEFSNPLYLLKTS
LEDRVSVLLQNNSSITGLLASFDEHMNLILINAEETGHSLNRFFPLLVIRGDSIIFVTRR
RFTSIT
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagcctcgctaacctacttacagtcagaaggcgctggccggaagactggaatg
gatgtggatcacagcaatgaagaatatatggaagcgcccctgtttcacggttcagctggc
gatagagtcacgcctgaatacacggagttttcaaaccctctttacctgttaaagacaagc
ctggaagaccgtgttagcgttctgttgcaaaataactcgtccataactggacttttggcg
agctttgatgaacatatgaatcttattttaattaacgcagaagagaccggacactcactc
aaccgcttctttcctttgctggtcatccggggagatagtattatttttgtgacacgcagg
cgatttaccagtattacctag
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