Gloeomargarita lithophora: GlitD10_2009
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Entry
GlitD10_2009 CDS
T09871
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
glt
Gloeomargarita lithophora
Pathway
glt01501
beta-Lactam resistance
glt01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
glt00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GlitD10_2009
01503 Cationic antimicrobial peptide (CAMP) resistance
GlitD10_2009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
glt03036
]
GlitD10_2009
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
glt02000
]
GlitD10_2009
01504 Antimicrobial resistance genes [BR:
glt01504
]
GlitD10_2009
Chromosome and associated proteins [BR:
glt03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GlitD10_2009
Transporters [BR:
glt02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GlitD10_2009
Antimicrobial resistance genes [BR:
glt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GlitD10_2009
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-barrel_RND_2
HH_YBHG
BSH_RND
Biotin_lipoyl
BSH_YknX
BSH_CusB
YknX_C
BSH_CzcB
NQRA_N
HH_EMRA
HH_CzcB
HH_MFP_RND
BSH_Fcp1
BSH_YhbJ
Motif
Other DBs
NCBI-ProteinID:
APB34335
UniProt:
A0A1J0AEJ4
LinkDB
All DBs
Position
complement(2038446..2039723)
Genome browser
AA seq
425 aa
AA seq
DB search
MASPRRWLNYGLWLLPGAGILWALTLWWRPAPPNTGKKAPPPRPVEVTEIQTGTGITRNT
LLGQVEALTQATIRAQTSGLVKEMLVQPGDQVRAGQTLVVLDNRDQNIALAQAQARLAEE
RSALARLEVGTRPEIIAQRQAELKAAQAREREAQDRLDRNSQLVKEGAIAERTLVEARAA
LEDARSQRLRAQAALAEAQAGATREERDTQRARVATAQASVQQLELQNQRTRITALSNGS
VRTCAVSVGSLVQSDDPVVTLVDANELDIYLELTEILAGQIRPGQMVTLTSRSLPGWQTT
APISAVIPATDPSSRRQQARLRLNNPPAGLLPGMAVQAELQSSNNVAGLVIPRDALTRRN
QEWLVFMIQAGDPPQAQALPVELVTDMGTQVLIRHPELRPGQKIVLRGGDGLRDQAPVKI
VNPPG
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccccgccgctggttaaattatgggttgtggttgctccccggtgcgggcatt
ctgtgggcgttgaccctttggtggcgccccgccccccccaacaccggcaaaaaagcccca
cccccccgtcccgtagaagtcacagaaattcaaacgggaaccggcataactcgcaatact
ttattaggacaagtagaagccctgacccaggccaccatccgggcacagaccagcggattg
gtcaaagaaatgctcgtgcaaccgggggatcaggtgcgggcggggcaaaccctggtggtt
ttggacaaccgtgaccaaaacattgccctcgcccaagcccaagcccggctcgctgaggaa
cgcagtgctctggctcgtttggaagtcggcacccgcccggagatcattgcccaacggcaa
gcagaactcaaggccgcccaagcccgggaacgggaagcccaagaccggttagaccgcaac
agccaactggtcaaggagggagccatcgccgaacgtaccttggtggaagcccgcgccgcc
ctggaggatgcccggagccaacgcctgcgtgcccaagccgccctcgccgaagcccaggcc
ggtgccacccgggaagaacgggacacccaacgggcacgggtggctaccgcccaagcatca
gtacagcaattagaactccaaaaccaacgcactcgcattaccgccctgagcaatggttcc
gtccgtacctgcgccgtgagtgtgggcagtttggtgcaaagcgatgacccggtggtgacc
ctggtggatgccaacgaactggacatttacctagaactgacggaaatcctggcggggcaa
atccgtcccggccaaatggtgaccctgaccagccgcagtctccccggttggcaaaccacg
gctcccatcagtgcggtgattcccgccaccgaccccagttcccgccgtcaacaggcgcgc
ctgcggttgaataatcccccggcggggttactcccaggcatggcggtacaagccgaatta
caaagtagtaacaacgttgctggtctggtgattccccgggatgccctcacccgccgcaac
caagaatggctggtgtttatgatccaggcgggcgaccccccccaagcccaagccttaccg
gtggaactggtcacggatatgggcacccaggtgttgatccgccatcccgaattgcgtccc
ggccaaaaaattgtcctgcggggcggggatggtctgcgggatcaagctcccgtcaaaatt
gtgaatccccccggttga
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