Geobacillus sp. Y4.1MC1: GY4MC1_3524 Help Entry GY4MC1_3524       CDS       T01348                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism gmc  Geobacillus sp. Y4.1MC1 Pathway gmc03030   DNA replication gmc03410   Base excision repair gmc03420   Nucleotide excision repair gmc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:gmc00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     GY4MC1_3524    03410 Base excision repair     GY4MC1_3524    03420 Nucleotide excision repair     GY4MC1_3524    03430 Mismatch repair     GY4MC1_3524  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:gmc03032]     GY4MC1_3524    03400 DNA repair and recombination proteins [BR:gmc03400]     GY4MC1_3524 Enzymes [BR:gmc01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      GY4MC1_3524 DNA replication proteins [BR:gmc03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      GY4MC1_3524 DNA repair and recombination proteins [BR:gmc03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      GY4MC1_3524    NER (nucleotide excision repair)     GGR (global genome repair) factors      GY4MC1_3524    MMR (mismatch excision repair)     DNA ligase      GY4MC1_3524   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       GY4MC1_3524 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH Nlig-Ia PTCB-BRCT BRCT_2 HHH_3 Zn_ribbon_NUD Motif Other DBs NCBI-ProteinID:  ADP76168 UniProt:  A0A7U4DML0 LinkDB All DBs Position complement(3510619..3512631) Genome browser AA seq 670 aa AA seqDB search MERQAAIKRIEELRELLNQYNYEYYVLDRPSVPDSEYDRLMQELIALEEQYPDLKTKDSP SQRVGGQALDAFQKVEHRTPMLSLANAFNEGDLRDFDRRVRQEVGDDVAYVCELKIDGLA VSVRYEDGYFVQGATRGDGVTGEDITENLKTIRSLPLRLNEPVTLEARGEAYMPKASFER LNEQRRQRGEELFANPRNAAAGSLRQLDPKIAASRHLDLFVYGLANAEELGIASHSAALD YLQQLGFKTNPERRRCANMDEVIQFVNEWQEKRPQLPYEIDGIVIKVDSFAQQEQLGATA KSPRWAIAYKFPAEEVVTKLIDIELNVGRTGVVTPTAILEPVRVAGTTVQRATLHNEDFI REKDIRIGDSVIIKKAGDIIPEVVNVVPDRRTGEEVPFVMPTHCPECASELVRIEGEVAL RCINPKCPAQIREGLIHFVSRQAMNIEGLGEKVISQLFREGLIHDVADIYRLTKDQLIDL ERMGEKSATNLLHAIEASKQNSLERLLFGLGIRHVGAKAAKVLAEHFETMDRLQNATKEE LMAIHEIGEKMADSIVTYFAKPEVKELLNELRAYGVNMEYKGPKTPKPGDVHSYFAGKTV VLTGKLESLSRNEAKEKIEQLGGKVTGSVSKNTDLVIAGADAGSKLAKAQQLHIEIWDET RFLEEIEQSK NT seq 2013 nt NT seq  +upstreamnt  +downstreamnt atggaacgacaagctgcgatcaagcgaatcgaagagcttcgcgagcttttgaatcaatac aattatgaatattatgtgcttgaccgtccatctgtgccggattcggaatacgaccggctt atgcaagaacttatcgcgttagaagaacaatatccggatttaaaaacgaaagattctccg tcgcaacgcgttggcggacaggcgttagacgcgtttcaaaaagtggaacatcgcacgccg atgttaagtctcgcaaacgcatttaacgaaggggatttgcgcgattttgaccgccgtgtg cgccaagaagtcggcgatgatgtcgcttatgtttgcgagctgaaaatcgatgggcttgct gtatctgtccgttatgaagacggctatttcgttcaaggggcgacgcgcggcgacggagtg accggagaggatattaccgaaaacttaaaaacgatccgctctttgccgcttcgcttgaat gagccggtaacgttagaagcgcgcggcgaagcgtacatgccgaaagcgtcgtttgagcgg ttgaacgaacagcgccgccagcgcggggaagagctgtttgccaatccgcgcaacgctgct gcgggctctttgcgccagctcgatccgaaaatcgcggcatcgcgccatcttgatttattt gtttatggtcttgcgaacgcggaagaattagggatcgcctcacatagcgcggcgctcgat tatttgcagcagcttggatttaaaacaaatccggaacgccgccgctgcgctaatatggac gaagtgatacaatttgtgaatgaatggcaagaaaaacgtccgcagctgccttatgaaatt gacgggattgtcataaaagtcgactcgtttgcgcaacaagaacaacttggcgcgacggcg aaaagtccgcgctgggccatcgcttataaatttccggccgaggaagtggtaacgaagctg attgacatcgagttaaatgtcgggcgcacgggagtggtgacgccgacagcgattttggag ccggtgcgtgtggcgggtacaacggtgcaacgtgctacccttcataacgaggattttatt cgtgagaaagatatccgcattggggattcggtcattatcaaaaaagcgggggacattatt ccggaagtcgtgaatgtcgtgccggaccggcgtacgggagaagaagtgccgtttgtcatg ccaacgcattgcccggaatgtgccagcgaattggtccggatcgaaggcgaagtagcgctc cgctgcattaatccaaaatgtccggcgcaaattcgtgaaggattgattcacttcgtatcg cgccaagcgatgaacatcgaggggcttggggaaaaggtgatttcccagctgttccgtgaa ggcctcattcatgatgttgctgacatttatcgcttgacaaaggatcagcttatcgatttg gaacggatgggagaaaaatcggcgaccaatttgctccatgccattgaagcgtccaaacaa aattcgttggagcgccttctctttggccttggaattcgccatgtcggtgcaaaagcagcc aaagtgttagcggaacatttcgaaacgatggaccgcctgcaaaacgcgacaaaagaagaa ttaatggcgattcacgagatcggcgaaaaaatggccgattcgattgtcacatattttgcc aagccggaagtaaaagagcttttaaatgaactgcgtgcttatggtgtcaatatggaatac aaggggccgaaaacgccaaaacctggcgacgttcattcgtattttgccggaaaaaccgtt gtattgacaggaaaactcgagtcattatcgcgcaatgaggcgaaagaaaaaattgaacag cttggcggcaaagtgaccggcagcgtgagcaaaaatacggatttagtcattgctggggca gacgcaggctcgaaactggcgaaagcgcagcagctccatatcgagatttgggatgagaca agatttcttgaagaaattgaacaaagtaagtag

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