Geobacter metallireducens: Gmet_0407
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Entry
Gmet_0407 CDS
T00295
Symbol
murE
Name
(GenBank) UDP-N-acetylmuramylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
gme
Geobacter metallireducens
Pathway
gme00300
Lysine biosynthesis
gme00550
Peptidoglycan biosynthesis
gme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Gmet_0407 (murE)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Gmet_0407 (murE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gme01011
]
Gmet_0407 (murE)
Enzymes [BR:
gme01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Gmet_0407 (murE)
Peptidoglycan biosynthesis and degradation proteins [BR:
gme01011
]
Precursor biosynthesis
Amino acid ligase
Gmet_0407 (murE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABB30650
UniProt:
Q39YM4
LinkDB
All DBs
Position
449113..450648
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AA seq
511 aa
AA seq
DB search
MRLEDLARVINPSEAGGSLALEIEGLYCDSRQVRSGGLFFALRGVATDGHDYIVASRDRG
AVAVVVEDPSRVPEGMTWLKVDDARLAMSRAAAAFYGNPTDGIPVVGITGTNGKTTTTYL
VEAVMARAGIPVAVLGTISYRFGDKTIPAPHTTPESVDLQRTIRDLVDRGAQGVVMEVSS
HALEQRRVDGCRFDVGVFTNLTRDHLDYHRDMESYFESKARLFTELLAADDTKPRRAAVI
NVDDPYGARLASDAVAPVVSYGLSPSVMVRAEMVTFSVDGISGTLVTPLGTIPFHSRLLG
RFNLYNILAAVAAGVALGLSPDAIRGGIEGDVRVPGRLERVDNDHGITVLVDYAHTGDAL
ENVLKTVAEIATGRIITVFGCGGDRDRGKRPVMGEIAGRFSDLSIVTSDNPRTEDAGAII
GEILGGIRSLGLREYGAEELITGFDAKGFAAVESRREAIRLAARVARPGDVLLLAGKGHE
DYQIIGTMKHHFDDREEVAAAFRELSSKGQG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgagactggaagatctggcacgggtcattaatccctctgaagcaggaggatctctggcg
ctggagatcgaagggctctactgcgattcacggcaggtgcggtccggcggtctctttttc
gcgttgaggggcgtggcgacagacggccatgattacattgtcgcctcccgcgaccgtggc
gcggttgccgtggtggtggaggatccgtcgcgggtccccgaaggaatgacctggctgaag
gtcgatgacgcgcgtcttgccatgtcccgtgctgccgcagccttctacggcaaccccacc
gatggtattcccgtggtcggtatcacggggaccaacggaaagacgaccactacgtacctg
gtggaggccgtcatggcccgagccggcatccctgtggcggttctcgggactatcagttac
cgcttcggtgacaagactatcccggctccccacacgactcccgagtcggtagatctgcag
cggaccatacgcgatctggtggaccggggcgcccaaggtgtggtcatggaggtttcctcc
catgcccttgagcagcgacgggtggatggatgccgcttcgatgtcggcgtcttcaccaat
ctcacccgtgaccacctggactatcatcgggacatggagtcgtacttcgaaagcaaggcg
cggctatttaccgagcttctggcagcggacgacacgaaaccccgacgtgccgcggttatt
aacgtggacgacccctatggcgcccgactcgccagtgacgcggttgcgccggtggtgagc
tacgggctgtctccttcagtcatggtccgggccgagatggtcaccttttctgtcgatgga
atctctggtaccctcgttaccccccttggtacgataccgtttcactcgcggcttctgggg
cggttcaacctctacaacatcctggcggctgtggcggctggcgtggccctgggactctcc
ccggatgcaattcgcgggggaatcgagggggatgtccgggtccctggacgccttgagcgg
gttgataacgaccatgggatcacggtgctggtcgattatgcccacacgggcgacgccctg
gagaatgtcctgaagaccgttgccgagatcgccaccggccggatcatcactgtattcggc
tgcggcggagaccgggatcggggaaaacggcccgtcatgggggagattgcagggcgtttc
agcgatctatccatcgtcacctccgacaacccgcgaaccgaggatgccggagcgattatt
ggcgagattctcggcggtatccgttctcttgggctccgggagtatggggcggaagaactc
atcaccggtttcgatgccaaaggatttgctgcggtggaatcgagacgcgaggcaatcagg
ctggccgcccgcgtggcacgtcctggggatgttctgctcctcgctggcaagggacacgag
gactaccagattatcgggacgatgaagcaccacttcgacgatcgggaagaggttgctgcc
gcttttcgggaactgtcatccaaaggacagggatag
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