Geobacter metallireducens: Gmet_0419
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Entry
Gmet_0419 CDS
T00295
Symbol
shc-2
Name
(GenBank) squalene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
gme
Geobacter metallireducens
Pathway
gme00909
Sesquiterpenoid and triterpenoid biosynthesis
gme01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gme00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Gmet_0419 (shc-2)
Enzymes [BR:
gme01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
Gmet_0419 (shc-2)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
Gmet_0419 (shc-2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Pec_lyase
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-ProteinID:
ABB30662
UniProt:
Q39YL2
LinkDB
All DBs
Position
complement(465281..467473)
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AA seq
730 aa
AA seq
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MAKGILNKFAVIAGNKNAGLTAEEECTVVAPIKEVSGKAVHCRQAVKMAEEYLLALQNPE
GYWVFELEADVTIPSEYIMLQRFLGREISPELRMRLENYLLDRQLPDGGWPLYAVDGFAN
ISATVKAYLALKVLGHSPQAPHMIRARIMVLSLGGAARCNVFTRILLALFGQLPWHTPPA
MPVEIVLLPQRFFFHLSKVSYWSRTVIVPMLLLYAKQPVCRLRPEEGIPELFNTPPDKLR
NLDGFQSGRWRKNAFIIIDRLLKRFNRFIPSAIHRKAMAEAEHWTRSRMQGSGGIGAIFP
AMAYAVMALRVLGCREDDPDYVRGMQAIDDLLQHRTPQEADSPRTGGPCIDSGTSAAFAF
DPSPHAAADGRGNSSICQPCNSPIWDTCLSLSALMEAGMPASHPAAKQAVEWLLSQQIFS
PGDWSLKAPDLEGGGWAFQFENTLYPDLDDTSKVIMSLLRAGALENGLYRDRVARGVNWV
LGMQSSDGGWAAFDIDNNYHYLNDIPFADHGALLDPSTSDLTGRCIELLSMVGFDRTFPP
IAQGIGFLRSKQEGSGAWFGRWGVNYIYGTWSVLSGLRQAGEDMQQPYIRRAVGWLTSCQ
NHDGGWGETCYSYDDPSLAGQGESTPSQTAWSLLGLMAAGDVHSLAVRRGVRYLLDHQNQ
WGTWEEKHFTGTGFPRVFYLRYHGYRHYFPLWALGVYSRLSSGQKTRQEERRHSSPGDLH
LPWLERIGRR
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagggaattctcaacaagtttgccgtgatcgccggcaacaagaacgccggactg
acggccgaggaagaatgcaccgtcgtcgcacccataaaagaggtctcgggaaaggccgtc
cactgtcgtcaggccgtcaaaatggcggaggagtatctgctggcgcttcagaatccagag
gggtactgggtctttgaactggaggcggacgtcacaataccgtcggagtacatcatgctt
cagcggtttctcggcagggagatttctccggaactgaggatgcggctggagaattacctc
ctggacaggcaattgcccgacggcggctggcccctctacgccgtggacggattcgccaat
atcagcgccacggtcaaggcctatctcgccctcaaggtgctggggcactcaccccaggca
ccccacatgatacgcgcgcgcatcatggtcctcagcctcggcggcgcggccaggtgcaat
gtgttcacgcgtatccttctggccctgttcggccagctcccctggcataccccaccggca
atgcccgtggagatcgtccttctgccacagcggtttttctttcatttgagcaaagtctcc
tactggtcgagaaccgtcatcgtccccatgctgctgctctacgccaagcaacccgtctgc
cggttgcggcccgaggagggaattcccgaactgttcaacacaccgcccgacaagctgcgc
aaccttgatggctttcagtcggggcgctggcggaaaaacgccttcatcatcattgaccgc
ctgctcaagcgtttcaaccgtttcatcccttccgccattcatcggaaggccatggccgaa
gcagagcactggacaagatcccgcatgcagggaagcggcgggatcggcgccattttcccg
gccatggcctatgcggtcatggccctccgcgtgctcggatgcagggaagacgaccccgac
tatgtacgggggatgcaggccatcgacgacctcctccagcatcgcactccccaggaagct
gattctccccgcacgggcggaccgtgcatcgacagcggcacgtcggcggcttttgccttc
gatccctctccccacgcggcagcggacggcagagggaacagcagcatctgccagccatgc
aattccccgatctgggacacctgcctaagcctttcggcgctcatggaagcaggcatgccg
gcgagccaccccgcagcgaaacaggccgttgaatggctgttatcccagcagattttctca
ccaggagactggtcgttgaaggctcctgatctggaggggggcggatgggctttccagttc
gaaaacaccctctatcccgacctggacgacacctcgaaagtcatcatgtcgcttctccgt
gccggagcgctggagaatgggctctaccgcgaccgggtggcccgcggcgtgaattgggta
ctcgggatgcagagcagtgacggagggtgggcagccttcgacatcgacaacaactaccac
tacctgaatgatatcccgttcgccgaccacggggcgctcctcgacccgagcacctcggac
ctgacgggacgctgcatcgagcttctctccatggtcggtttcgacaggacgtttcccccc
atcgcgcaggggatcggtttcctgcgctcgaagcaggaagggagcggcgcctggttcggc
cgatggggggtaaactacatctacggtacgtggtcggtgctgtccggcctcagacaggca
ggggaagatatgcagcagccctatatccgcagggcagtgggatggttgacgtcatgccag
aaccacgacgggggatggggagaaacctgctattcctacgacgatccttcgctggccggc
caaggggagagcaccccgtctcagacggcctggagtctcctggggctcatggccgccgga
gatgttcacagcctggccgtccggcgtggcgtgcgctacctgctcgaccaccagaatcaa
tggggaacctgggaggagaaacattttaccggtaccggattcccgagggtcttttacctg
cgctaccacgggtaccgccactactttcccctgtgggcgctcggcgtctattcacggctc
agctcgggacaaaagacccgccaggaggaacgccgccattcatcgcccggcgatctccat
ctcccttggctggagagaatcggaagacgatag
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